Stenotrophomonas aracearum: PDM28_03230
Help
Entry
PDM28_03230 CDS
T10111
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00260
Glycine, serine and threonine metabolism
sarc00460
Cyanoamino acid metabolism
sarc00630
Glyoxylate and dicarboxylate metabolism
sarc00670
One carbon pool by folate
sarc00680
Methane metabolism
sarc01100
Metabolic pathways
sarc01110
Biosynthesis of secondary metabolites
sarc01120
Microbial metabolism in diverse environments
sarc01200
Carbon metabolism
sarc01230
Biosynthesis of amino acids
sarc01240
Biosynthesis of cofactors
sarc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PDM28_03230
09102 Energy metabolism
00680 Methane metabolism
PDM28_03230
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PDM28_03230
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PDM28_03230
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PDM28_03230
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PDM28_03230
Enzymes [BR:
sarc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PDM28_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WNH49360
LinkDB
All DBs
Position
722437..723690
Genome browser
AA seq
417 aa
AA seq
DB search
MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFDADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNEQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
VDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLPHAHVVTSTTHKTLRGPRGGIII
AKGAGEEIEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPGFKAYQQQVVKNAQAMAT
TLIARGYKIVSGGTENHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYTEQDCVELANLIADVLDAPADAAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccattgcc
gccgaaacccagcgtcaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggccgtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgaacagctggcgatcgac
cgcctcaagcagctgttcgacgccgactacgccaacgtgcagccgcacagcggctcgcag
gccaaccaggcggtgtacttcgcgctgctgcagccgggcgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggggccaaggtcaatgcctcgggcaagctgttc
aacgccgtccagtacggcgtgaacgagcagggtctgatcgactacgacgaagtcgagcgc
ctggccttggagcacaagccgaagatggtcgtggccggcttctccgcctattcgcaggtg
gtggactgggcgcgcttccgtgccatcgccgacaaggtcggtgcttacctgttcgtggac
atggcgcacgtggccggcctggtcgccgctggcgtctatccgagcccgctgccgcacgcc
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcatc
gccaagggcgccggcgaagagatcgagaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgcggccaaggccgtggccttcaaggaagcgctg
gagccgggcttcaaggcctaccagcagcaggtggtcaagaacgcccaggcgatggccacc
accctgatcgcgcgcggctacaagatcgtctccggcggcaccgaaaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggacgcggaagccgccctcggcaaggcc
cacatcaccgtcaacaagaactcggtgccgaacgacccgcggtcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggcggtgaccacccggggctacaccgagcaggactgcgtg
gaactggccaacctgatcgccgacgtgctcgacgccccggccgatgccgcggtgatcgcc
cgcgtccgcgacgcggtcagcgcccagtgccgcaagtacccggtctacggctga
DBGET
integrated database retrieval system