Stenotrophomonas aracearum: PDM28_03345
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Entry
PDM28_03345 CDS
T10111
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00300
Lysine biosynthesis
sarc00550
Peptidoglycan biosynthesis
sarc01100
Metabolic pathways
sarc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PDM28_03345 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDM28_03345 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PDM28_03345 (murF)
Enzymes [BR:
sarc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PDM28_03345 (murF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WNH49380
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Position
743055..744449
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AA seq
464 aa
AA seq
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MKRTPLSLIAHWAGGEIHGEDTAIDAISNDTRTLAPGSLYVALRGERFDGHDFAADAVAR
GASAMLVERLLDVAVPQIVVGDSEHALGRIAAGMQRDRSAAVFAITGSNGKTSVKSLLLA
ILEQVARERGAVVYANPGNRNNEIGLPLAVIDAPEDADFAVYEMGAGKPGDIAYLTDIAR
PQYALVNNIAPAHLERMGSLQGVASTKGAIYAALPADGVAVINADDAYGAWFEQHVVGQP
PRSRVLRYALDHSADVTAQAIKPAADGSQFTLVAPTGAVSLTLALPGRHNISNALAAASL
ALAAGIGLDSIAAGLARAEPVPGRQIAHRLPSGAVLIDDSYNANPGSLAAAIDALAASKD
EAWLVLGDMRELGPDGEALHAQAGRRAREAGLKRLYTLGTLSTAASQAFGEGGRHFQSHD
ALAAALADELHAGVRCLVKGSRGSAMDKIVKALLARGEETPHVA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaccccgctgtcgctgatcgcgcattgggccggtggcgagatccatggcgaa
gacaccgccatcgacgccatcagcaacgacacccgtaccctcgcaccgggcagcctgtac
gtggccctgcgcggtgagcgtttcgatggccatgacttcgccgccgatgcggtggcgcgc
ggcgccagcgcgatgctggtcgaacgcctgctcgacgtggccgtgccgcagatcgtggtc
ggcgacagcgagcatgcgcttgggcgcatcgccgccggcatgcagcgcgaccgcagcgcc
gcggtgttcgcgatcaccggcagcaacggcaagaccagcgtcaagagcctgctgctggcg
atcctggagcaggtggcgcgcgagcgcggtgcggtggtgtatgccaacccgggcaaccgc
aacaacgagatcggccttccgctggcggtgatcgacgccccggaagacgccgacttcgcc
gtctacgagatgggcgccggcaagccgggcgacatcgcctacctcaccgacatcgcgcgc
ccgcagtacgcgctggtcaacaatatcgcaccggcgcacctggagcggatgggcagcctg
cagggcgtggccagcaccaagggcgcgatctacgccgccctgccggccgacggcgtggca
gtgatcaacgccgacgacgcctatggcgcctggttcgaacagcacgtggtcggccagccg
ccgcgcagccgggtgctgcgctatgcgctggaccacagtgccgacgtcaccgcgcaggcg
atcaagccggccgccgacggcagccagttcaccctggtcgccccgaccggcgcggtcagc
ctcacgctggccctgccgggtcgccacaacatcagcaacgcgctggccgcggcctcgctg
gcgctggccgccggcatcggcctggacagcatcgccgccggcctggcccgcgccgaaccg
gtgccgggccgccagatcgcgcaccgcctgcccagcggcgcggtgctgatcgacgacagc
tacaacgccaaccccggttcgctggcggcggccatcgacgcgctggccgcgtcgaaggac
gaggcctggctggtactgggcgacatgcgcgaactcggtccggatggtgaggccctgcac
gcgcaggccggccgccgtgcacgcgaggccgggctgaagcgcctgtacacgctgggcacg
ctgagcaccgcggcatcgcaggcgttcggcgaaggcggccgccacttccagagccacgac
gcgctcgccgcagcgctggctgatgaactgcatgctggcgtgcgctgcctggtcaagggc
tcgcgcggcagcgccatggacaagattgtgaaagcgctgctggcgcgaggagaggaaacc
ccccatgttgcttga
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