Stenotrophomonas aracearum: PDM28_04195
Help
Entry
PDM28_04195 CDS
T10111
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_04195
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
OmpA
OprF
DUF3575
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
WNH49537
UniProt:
A0ABY9YFR0
LinkDB
All DBs
Position
912270..913358
Genome browser
AA seq
362 aa
AA seq
DB search
MNKKILTAALLGGLAFAQAASAQSSFDDRWYLTGSAGFNFQDSDRLTNDAPFVTLGLGKF
VSPNWSLDFDLNYQNPNFDANQDLNWSQYGASVDARYHFIQDGRGWNPYLLMGLGYQKSE
EEFDNFPSPDSPGERKDGNFAAKVGVGLQTTFEKRVAVRAEVAYRGDFDDKSIAAPDESW
FGDVLASVGVVIPLGPPPAAPVVAPPPAAPSCADLDDDGDGVNNCDDKCPDSQPGQTIGP
DGCPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATQILVRYPDLRVEVAGHTDLCGKEDY
NQKLSERRATTVYNYLTQNGVAASRLTGPIGYGESRPLEQTPQTFPACKSEKNRRTELNV
QN
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagatcctcactgccgcgctgctgggcggcctggcgtttgcccaggcagct
tcggcgcagtcgtcctttgatgaccgctggtacctgaccggttcggcgggcttcaacttc
caggatagcgaccgtctgaccaacgatgctccgttcgtgaccctgggcctgggtaagttc
gtcagcccgaactggtcgctcgatttcgacctgaactaccagaacccgaacttcgacgcc
aaccaggatctgaactggagccagtacggcgcgtcggtcgatgcccgttaccacttcatc
caggacggccgtggctggaacccgtacctgctgatgggcctgggctaccagaagtcggaa
gaagagttcgacaacttcccgtcgccggacagcccgggtgagcgcaaggacggcaacttc
gccgccaaggtcggcgtcggcctgcagaccaccttcgaaaagcgcgttgcagtccgtgcc
gaagtggcctaccgcggtgacttcgacgacaagagcatcgctgctccggacgaaagctgg
ttcggcgacgtgctggcctcggtcggcgtcgtgatcccgctgggcccgccgccggctgcc
ccggttgtcgctccgccgccggctgccccgagctgcgccgacctggatgacgacggtgac
ggcgtcaacaactgcgacgacaagtgcccggattcgcagccgggtcagaccatcggtccg
gacggttgcccggtgccggtctccatcgacctgaagggcgtcaacttcgacttcgacaag
tcgaacctgcgtccggacgccgtggcgatcctgagcgaagccacccagatcctggtgcgt
tacccggacctgcgcgtcgaagtggctggccacaccgacctgtgcggcaaggaagactac
aaccagaagctgtccgagcgtcgtgcgaccaccgtgtacaactatctgacccagaacggc
gttgctgccagccgtctgaccggtccgatcggttatggcgagagccgtccgctggagcag
accccgcagaccttcccggcctgcaagagcgagaagaaccgtcgtaccgagctgaacgtc
cagaactga
DBGET
integrated database retrieval system