KEGG   Stenotrophomonas aracearum: PDM28_04440
Entry
PDM28_04440       CDS       T10111                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sarc  Stenotrophomonas aracearum
Pathway
sarc03030  DNA replication
sarc03430  Mismatch repair
sarc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sarc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PDM28_04440 (dnaQ)
   03430 Mismatch repair
    PDM28_04440 (dnaQ)
   03440 Homologous recombination
    PDM28_04440 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sarc03032]
    PDM28_04440 (dnaQ)
   03400 DNA repair and recombination proteins [BR:sarc03400]
    PDM28_04440 (dnaQ)
Enzymes [BR:sarc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PDM28_04440 (dnaQ)
DNA replication proteins [BR:sarc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PDM28_04440 (dnaQ)
DNA repair and recombination proteins [BR:sarc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PDM28_04440 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WNH49573
UniProt: A0ABY9YFB7
LinkDB
Position
960007..960732
AA seq 241 aa
MRQIILDTETTGLEWRKGNRIVEIGCVELLERRPSGNNYHQYLKPDCEFEQGAQEVTGLT
LEFLADKPAFAQVAEEFLAYIDGAELIIHNAAFDLGFLDYELSLLGDQYGKITDRCTVID
TLKMARERYPGQRNSLDALCKRLGVDNAHRQLHGGLLDAQILGDVYIALTSGQEEIGFGS
ADDVRPGSAQAQAFDTSRLLPRPRVVATVSELEAHDARLAKLRKKAGHAIWDGPKVEEAV
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgtcagatcatcctcgacaccgaaaccaccggcctggaatggcgcaagggcaaccgc
atcgtcgaaatcggctgtgtggaactgcttgagcgccgcccgagcggcaacaactaccac
cagtacctcaagcccgactgcgagttcgaacagggcgcgcaggaagtcaccggcctgacc
ctggagttcctggccgacaagccggcgttcgcgcaggtggccgaggagttcctcgcctac
atcgacggcgccgagctcatcatccacaacgcggcgttcgacctgggcttcctggattac
gagctgtcgctgctgggcgaccagtacgggaagatcaccgaccgctgcacggtcatcgac
acccttaagatggcgcgagagcgctatccggggcagcgcaattcgctggacgccctgtgc
aagcggctgggcgtggacaacgcgcaccgccagctgcatggcggcctgctcgatgcccag
atcctgggcgatgtgtacatcgcgctgacttcgggccaggaggaaatcggcttcggttct
gccgacgacgtccgtcccggcagtgcacaggcgcaggcgttcgacaccagccgcctgctg
ccgcgcccgcgcgtggtcgccaccgtctcggagctggaagcgcacgacgcgcgcctggcc
aagctgcgcaagaaggccggccacgcgatctgggacggcccgaaggtggaagaagccgta
gcctga

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