Stenotrophomonas aracearum: PDM28_05115 Help Entry PDM28_05115       CDS       T10111                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism sarc  Stenotrophomonas aracearum Pathway sarc02020   Two-component system sarc02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sarc00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     PDM28_05115  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     PDM28_05115  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sarc03021]     PDM28_05115 Transcription machinery [BR:sarc03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      PDM28_05115 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HisKA HTH_38 Sigma70_r4 HTH_Crp_2 HTH_23 HTH_Tnp_ISL3 Motif Other DBs NCBI-ProteinID:  WNH49697 UniProt:  A0ABY9YFR1 LinkDB All DBs Position complement(1081230..1082669) Genome browser AA seq 479 aa AA seqDB search MKARLQTSLGQQLVMTPQLRQAIKLLQMSTTELELELAEAVETNPLLDWAENAEPGLEAA PGSDERPAEAAERTDERDARTDGADDWAPGESDWSSGGSGGSFDDDDNGSAAERVAETES LADHLLWQLHLSHLSRRDRSIGAALIDALEEDGYLREPLATIAETLLPAIHADDAEILTV LHQIQRFDPIGVGARSLGECLQLQLDVLDPQTPGLALARRIADGPLERLPRSGVNGIAHE LREPVDAVETAVQLLRSLDPRPGTQIGDLAHDSYVVPDCVVWRQNGSWRAALAGHAGPKV VIHRGYEQMIRRCGESDAGYLRAHLQEARWLLKGLEARGETLLRVMRCLLQQQAAFLEFG EQALRPLTLREVAGELGLHESTISRAIARKYVRTPRGTLALRAFFASGIDTDSGGEASST AIQAMIRRLIDDENPRKPLSDAKLADLLKTSGIPVARRTVAKYREAMNISASHERVRIA NT seq 1440 nt NT seq  +upstreamnt  +downstreamnt atgaaagcacggctgcagacatcgctggggcaacaactggtcatgacgccgcagctgcgt caggcgatcaagttgctgcagatgtcgaccacggagctggagctggagctggccgaggcg gtggaaaccaatcccctgctggactgggccgagaacgccgagccgggcctggaggccgca cccggcagcgacgagcgcccggccgaagcggccgagcgcaccgacgagcgcgacgcccgc accgacggcgccgacgactgggcgcccggcgaaagcgactggagcagcggcggcagtggc ggttccttcgacgatgacgacaacggcagcgccgccgagcgcgtggccgagaccgagagc ctggccgaccacctgctgtggcagctgcacctctcgcacctgtcccggcgcgaccgcagc atcggcgcggccctgatcgacgcactggaagaggacggctacctgcgcgagcccctggcc accatcgccgaaaccctgctcccggccatccatgccgacgacgccgagatcctcaccgtc ctgcaccagatccagcgcttcgacccgatcggggtcggcgcgcgcagcctgggcgaatgc ctgcagctgcagctggacgtgctggacccgcagacccccggcctggcgctggcccggcgg atcgccgacggcccgctggagcgcctgccgcgcagcggcgtgaacggcattgcccacgag ctgcgcgagccggtggatgcggtggagaccgccgtgcagctgctgcgctcgctggacccg cgccccggcacccagatcggcgacctggcccacgacagctacgtggtcccggactgcgtg gtctggcgccagaacggcagctggcgggcggccctggccggccacgccggacccaaagtg gtcatccaccggggctatgaacagatgatccgccgctgcggcgaaagcgacgccggctac ctgcgcgcccacctgcaggaggcgcgctggctgctcaagggcctggaagcccgtggcgag accctgctgcgggtgatgcgctgcctgctgcagcagcaggccgccttcctggagttcggt gaacaggccctgcgcccgctgaccctgcgcgaggtggccggcgagctgggcctgcacgaa tcgaccatttcccgcgccatcgcccgcaagtacgtgcggaccccgcgcgggaccctggcc ctgcgggcgttcttcgcctccgggatcgacaccgatagcggcggcgaggcctccagcacc gccatccaggccatgatccgacgcctgatcgacgacgaaaacccgcgcaagccgctttct gacgccaagctggctgacctgctcaagacctccggaataccggtggcgcggcgcaccgtg gcgaagtatcgtgaagccatgaacatttccgcctcgcacgaacgagtccgcatcgcctga

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