Stenotrophomonas aracearum: PDM28_05555
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Entry
PDM28_05555 CDS
T10111
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
sarc Stenotrophomonas aracearum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
WNH49779
LinkDB
All DBs
Position
complement(1173248..1176673)
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AA seq
1141 aa
AA seq
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MNLIRHALATSIALALGHACLVEECAAQATVGPGARTTTLTATTGTTTVVGNTTIDTSAG
ATDGVLANGGDVVLDMQAGASPGAIVVRTGNSRGLHATNGTIAAPNGLNVFTNRGAALFA
DGGSIIVNGGNIGTTNGRLAGVTAGNVRIANTSYNDPLLAPGGGDGVGVEGTGRAEIAGG
NRLFVGGATNRVGLGVQGPSASIAVSGALPITFQNNGALGIYLYGGGQLQASAPIALTFT
GTSSVGLTVDGGANAAPLSDLSMNFASTVTTSSSGTAVVATNGGSASLNHLVVSGPGVGL
GAWVRSGSALTLTGGSQVTVSSNNNGQSYAFSPGPTSSMATTTIFGSVSGASQRAGALVQ
GGTLNSTGTTWSNPTANGYGLYAGYNGSVPSTITLSGDTVTTTGTRGTTLQTYNNAQVAA
TNSSLRNDNGLVAIYQWSYNGGAGQVTRDNTIALVNSTVTTTGSAYGLYSNNASGGFAHA
VSLQGGSLASDRWAIIAEGPLLFSASDGARVAGVQGLLSAEGSSGPALPTLVQLNADRSV
LQGLAEADSASQANIALANQSQWTGAAWNITNVDVDATSSWIIPETSTVSQLVTNNGRIA
FTPMTGDLYKRLYTGSYMGGSGSVFALNTYLGEDDSPTDQLILEGGSASGQSLLEFTNTG
GPGALTRGDGIRVVVALDGATSAPNAFTQAVALLAGPYNYRLYRGGDTPGTGDDWFLRSA
LDCSDPSAPSPPCPAPTPTPPDPVPPTPDPPTPVPPPPEPEPPAPPAPDPAPDPIPDPEP
PPIPVPPAPTPTPPTPPDPPEPGPEPVPDYRAEVSLYTALPAIALRYGWATLGNLHERVG
EQEQLRARADLRGDDYFNGAWVRVIGENGDAEGRRRGVYEGAPRYDYDILAIQAGTDAYA
VERENGLRDHAGFYLGQGRMRSDVIHYDGNLAGRNEVRATSLGLYWTRYWEEGQYLDAVW
QGSWGKGKSRSSNGLLLDRDTFGWGVSLEGGYPFRQDGNDTRVFEPQAQVIYQRIDKDSN
ADPAAMIRFDDMDSLAARLGLRWADTWTLEPTDNGIRRLFSGWLRLNVWHEFRGQPVTEF
SSAEGYVPFKADLQGTWWQLNAGMTWQLGASTSTYANVGYQKSFNRTFDAWDAKVGMRWN
W
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgattcgacacgccctcgccaccagcatcgcgctcgcactcggccacgcctgc
ctggtcgaagaatgcgccgcacaggccactgtggggcccggcgcccgcaccacgacgctc
accgccaccacgggcaccaccacggtcgtgggcaacaccaccatcgacaccagcgccggc
gccaccgatggcgtactcgccaacgggggcgatgtggtgctggacatgcaggccggcgca
tcgcccggtgcgattgtcgtgcgcaccggcaacagtcgtggcctgcacgctaccaacggc
acgatcgcagcgccaaatgggttgaacgtgttcacgaaccgcggcgccgccctgttcgcg
gacggcggcagcatcatcgtcaacggtggcaacatcggcaccaccaacgggcgcctggcc
ggcgtcacggcgggaaacgtgcgcattgccaacaccagttacaacgatccgctgctggca
ccaggcggtggcgatggcgtaggcgtcgaaggaaccggtcgcgccgaaattgccggtgga
aaccgtctgttcgtaggaggcgctaccaaccgggtcgggttgggcgtgcagggtccatcc
gccagcatcgcagtcagcggcgcgcttccgatcacgttccagaacaatggcgcactcggc
atctacctgtatggcggcggtcaactgcaggccagcgcgcccattgcgctcaccttcacg
ggcaccagttcggtcgggctcactgtggacggcggcgccaacgccgcgccgttgtcggac
ctgagcatgaacttcgcttcgaccgtgaccaccagctcatccggcactgccgtggttgcc
accaacggtggatcggccagcctgaaccacctggtggtcagtggacccggtgtggggctt
ggggcctgggtgcgcagcgggtcggcgctgacactgaccggcggcagccaggtcacggtc
tcctcgaacaacaacgggcagtcctacgcattttcgccgggcccgacctcgtcgatggcc
acgaccacgattttcggaagcgtatcgggtgcctcgcagcgcgcgggtgcgttggtgcag
ggtggcaccctcaacagtaccgggacgacctggagcaatcccaccgccaacggctacggg
ctgtacgccggttacaacggcagcgtgccaagcacgatcaccctgagcggcgacaccgtc
accaccacgggcacgcgcggcaccaccctgcagacctacaacaacgcgcaggtcgcggcg
accaacagttcgctgcgcaacgacaacgggctggttgcgatctaccagtggagctacaac
ggcggcgccggccaggttacccgcgacaacaccatcgcactggtcaacagcaccgtcacc
accaccggcagcgcctacggcctgtattcaaacaacgcctcgggcggtttcgcgcatgca
gtgagcctgcaggggggcagcctggccagcgaccgctgggcgatcatcgccgaaggcccg
ctgctgttcagcgccagcgacggcgcgcgcgtcgccggcgtgcagggcctgctgtcggcc
gagggcagcagcgggccggcactgcccaccctggtgcaactcaatgccgaccgcagcgtc
ctgcaagggctggcagaagcggattcagccagccaagccaacatcgcgctggccaaccag
tcgcagtggaccggcgccgcgtggaacatcaccaacgtcgacgtggatgccaccagcagc
tggatcattccggaaacgtctaccgtctcgcagcttgtcaccaacaacgggcgcatcgcg
ttcacgccgatgaccggtgatctctacaagcgtctgtacaccggcagctacatgggtggc
agtggcagcgtgtttgcactcaacacctacctgggcgaagacgattcaccgaccgaccag
ctgatactggagggcggcagcgccagcggccagagcctgctggaattcaccaacacaggt
ggccccggcgcgctgacccgcggcgacggcatccgcgtggtggtggccctggacggtgcc
acctccgcgccgaatgcgtttacccaggcggtagccttgctggcgggaccctacaactac
cggctctatcggggcggcgacacgcccggcaccggcgacgactggttcctgcgctccgcg
ctggactgcagcgacccgtcggcgccctccccgccatgccccgcccccacgccgacgccg
cctgacccggtaccgccgacacccgatccccccaccccggtgccgccaccgcccgagcct
gagccgccggcaccgccagcgccggacccggcccccgatcccatcccggatccggagcca
ccgccgatcccggtgccgcctgctccgaccccgaccccacccacgccaccggacccgccc
gagccgggtcccgagcccgtgcccgactatcgcgcggaggtttcgctgtacaccgcgctg
ccggcgatcgcgctgcgctacggctgggccacgctgggcaacctgcacgagcgcgtgggc
gagcaggaacagctgcgcgcacgcgccgatctgcgcggcgacgattacttcaatggcgcc
tgggtgcgcgtgatcggcgagaacggcgacgccgaaggccgccgccgcggtgtgtatgaa
ggcgcgccccgctacgactacgacatcctcgccatccaggccggcaccgacgcgtacgcg
gtcgagcgtgaaaatggcctgcgcgaccacgccggcttctacctgggccaaggccgcatg
cgcagcgacgtgatccactacgacggcaaccttgccgggcgcaacgaagtgcgcgccacc
tcgctcggcctgtactggacgcgttactgggaagagggtcagtacctggacgcggtgtgg
cagggcagctggggcaaaggcaagtcgcgttcctccaacggcctgctgctggaccgcgac
accttcggctggggcgtctccctcgagggaggctatccattccgccaggacggcaacgac
acccgcgtgttcgaaccccaggcacaggtgatctaccagcgcatcgacaaggacagcaac
gcagacccggcggcgatgatccgtttcgacgacatggactcactcgccgcgcggctgggg
ctgcgctgggccgatacctggacgctggagccgaccgacaacggcatccggcgcctgttc
agtggctggttgcggctgaatgtctggcatgaattccgcggccagccggttaccgaattc
tcctccgcggaaggctacgtgccattcaaggccgacctgcagggcacctggtggcagctg
aatgcaggaatgacctggcagctgggcgcgtccaccagtacctatgcgaacgtcggttac
cagaagagcttcaaccggaccttcgacgcatgggatgcgaaggtcgggatgcgatggaac
tggtga
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