Stenotrophomonas aracearum: PDM28_05745
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Entry
PDM28_05745 CDS
T10111
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PDM28_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarc03400
]
PDM28_05745
Enzymes [BR:
sarc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PDM28_05745
DNA repair and recombination proteins [BR:
sarc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PDM28_05745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WNH49815
LinkDB
All DBs
Position
1228293..1228967
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AA seq
224 aa
AA seq
DB search
MPRFRRGFDVDEAHDWLSRRDRRLGTWMKRLGPIEPPPGWARSFDPVDALARAILFQQLS
GKAASTIVRRVETAIGSTRLHADTLSRIDDAGLRTCGVSGNKALALRDLARREAAGEVPD
LRRMSVMEHDAIVEALVPIRGIGRWTVEMMLMFRLGRPDILPIDDLGIRKGAQRVDKAEV
MLTPKELALRGEKWGPFRTYASLYLWRIADFSEVPKTATNRSQD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcttccgccgtgggttcgacgtggacgaggcgcacgactggctctcacggcgc
gaccgtcggctgggcacgtggatgaagcgcctgggcccgatcgagccaccgccgggctgg
gcgcgcagtttcgacccggtggacgcgttggcccgcgcgatcctgttccagcagctcagc
ggcaaggccgcatcgacgattgtaagacgggtggaaacggcgatcggcagcacccgcctg
cacgcggacacgctgtcgcgcatcgacgatgccggcctgcgcacctgcggcgtgtccggc
aacaaggcgctggccttgcgcgacctggcccggcgtgaagccgcaggcgaagtaccggac
ctgcgccggatgtcggtgatggagcacgacgccatcgtagaagcgctggtgccgatccgc
ggcatcggccgttggacggtggagatgatgctgatgttccgcctcggccggccggacatc
ctgccgatcgacgatctcggcatccgcaagggcgcccagcgcgtggacaaggccgaggtg
atgctgacgccgaaggaactggcgctgcgcggcgagaagtgggggccgttccggacctac
gccagcctgtacctgtggcggattgccgatttcagcgaagtgccgaagacggcgacgaac
cggtcgcaggattga
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