Stenotrophomonas aracearum: PDM28_06180
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Entry
PDM28_06180 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_06180
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_06180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH49893
UniProt:
A0ABY9YGS7
LinkDB
All DBs
Position
complement(1333100..1335292)
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AA seq
730 aa
AA seq
DB search
MTMRSSRSLTPHALSLALAVALVPSLATAADDAGERDHHLTELSAVKVTATPLQGDAESL
ARPVDVLAGERLDEQKAGTLGDTVAKLPGVQSTFFGPGVGRPIIRGQEGPRVAVLSNGMG
NMDASTVSADHATSIEPFLADQIEVLKGPATLLFGSGAIGGAVNVVDGRIARDLPDRPLS
GRAELRGNSVNDERSGMFRLDGVNGNWVLHVDGLVRNGDDYRIPGYAVIDGLEDHSGHDH
EEGDTDEPRRGTLDNSSIRTRAGGVGATWLGEGGFFGASASTYRTNYGIPNGAHVHADDD
HDHDHDHGDEEEEGDEHDVRIDMVQNRFEAKGGIYNPVSFLKNINLRTAYTDYEHVELKA
GTPSTRFTNRGIEGRLEAVQQQIGGWDGAFGLQFGNSDFGAKGEEAFVPDTGTRNLGVFV
LQEKQFGPFKLELGGRHDQVKLDPTGDYRARTFDATNLSAAGIWKLNDAVDLRFGVDGSE
RAPTNEELYAAGAHIATRSLEIGDANLKTERGQRVELGIHTHSDRLDFSASIYQTKFKDF
IYLADTGVVESLPVRLWTQQDATFKGAEAEALVHLFEGNSGDWDLRVFGDYVKAELDGSG
SRTVDIAVPHGDHDHNYTVDLANSGYLPRIAPARVGADLRWSRDGWRASVGAVRYSSQKD
TAQNEEPSAGYTLVDAHFAYRWDRSDSNSYEVFLDGNNLTNREARAHTSLLRDYSPLPGR
GVAFGIRAYF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgaccatgcgttcttcccgctccctcacgccgcacgccctctccctggccctcgccgtg
gccctggttccctccctggccacggccgccgacgatgccggcgaacgtgaccaccacctg
accgagctgtctgcggtcaaggtcaccgctaccccgctgcagggcgatgccgaatcgctg
gcacgtccggtcgacgtgctcgccggcgaacgcctggatgaacagaaggccggcaccctc
ggcgacaccgtggccaagctgcccggcgtacagagcaccttcttcggccccggcgtcggc
cgcccgatcatccgcggccaggaaggcccgcgcgtggccgttctctccaacggcatgggc
aacatggatgcctccaccgtcagcgccgaccatgccaccagcatcgaaccgttcctggcc
gaccagatcgaagtgctcaagggcccggccaccctgctgttcggcagcggcgccatcggt
ggtgcagtgaacgtggtggacggccgcatcgcccgcgacctgcccgaccgaccgctcagc
ggccgcgctgaactgcgtggcaactcggtcaacgacgagcgcagcggcatgttccggctc
gacggcgtcaacggcaactgggtgctgcatgtcgacggcctggtgcgcaacggcgacgat
taccgcattcccggttacgccgtgatcgacggcctggaagaccacagcggccacgaccac
gaagaaggcgacaccgacgaaccgcgtcgcggcaccctggacaacagctcgatccgcacc
cgcgccggcggcgttggcgcgacctggctcggcgaaggcggcttcttcggtgcctcggcc
agcacctaccgcaccaattacggcattcccaacggcgcccacgtgcacgccgacgacgac
catgaccacgatcacgaccatggcgacgaagaggaagaaggcgacgagcacgacgtgcgc
atcgacatggtgcagaaccgcttcgaagccaagggcggcatctacaacccggtctcgttc
ctgaagaacatcaacctgcgcaccgcctacaccgattacgaacacgtcgaactcaaagcc
ggcacgccctccacccgcttcaccaaccgcggcatcgaaggccgtctggaagcggtgcag
cagcagatcggcggctgggacggcgcgttcggcctgcagttcggcaacagcgacttcggc
gccaagggggaagaagcgttcgtgcccgacaccggcacccgcaaccttggcgtgttcgtg
ctgcaggaaaagcagttcggtccgttcaagctggaactcggcggccgccacgaccaggtc
aagctggaccccaccggcgactaccgcgcgcgcaccttcgacgccaccaacctgtcggca
gcgggtatctggaagctcaacgatgcggtcgacctgcgctttggcgtggacggctccgag
cgtgcccccaccaacgaagagctgtacgccgccggtgcgcacatcgccacccgctcgctg
gaaatcggcgacgccaacctgaagaccgagcgcggccagcgcgtggagctgggcatccac
acccacagcgaccgcctggacttctctgcgtcgatctaccagaccaagttcaaggacttc
atctacctggccgataccggcgtggttgaaagcctgcccgtgcgcctgtggacgcagcag
gacgccaccttcaagggcgccgaggccgaagcgctggtgcacctgttcgaaggcaacagc
ggcgactgggacctgcgcgtgttcggcgactacgtgaaggccgaactggatggcagcggc
agccgcacggtcgacatcgccgtgccgcatggcgaccacgaccacaactacaccgtggac
ctggccaacagcggctacctgccgcgcatcgccccggcccgcgtcggtgccgacctgcgc
tggtcgcgtgacggctggcgcgcctcggtgggcgcggtgcgttacagcagccagaaggac
accgcccagaacgaagaaccgagcgccggctacaccctggtcgacgcgcacttcgcctac
cgctgggaccgcagcgacagcaacagctacgaggtgttcctggacggcaacaacctgacc
aaccgcgaggcccgtgcccacacctcgctgctgcgcgactactcgccgctgccgggccgt
ggtgtcgcctttggcatccgcgcgtacttctga
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