Stenotrophomonas aracearum: PDM28_06205
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Entry
PDM28_06205 CDS
T10111
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc03410
Base excision repair
Brite
Enzymes [BR:
sarc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PDM28_06205
Transcription factors [BR:
sarc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PDM28_06205
DNA repair and recombination proteins [BR:
sarc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PDM28_06205
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNH49898
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Position
complement(1338157..1339614)
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AA seq
485 aa
AA seq
DB search
MNAALPLDYAACESARLARDARFDGVFFTAVRSTGIYCRPVCPAPAPKPANVDYYPTAAA
AAAAGFRPCLRCRPELAPEAQDALSNETLQRALALIHDGYLQDAAVGDLAARLGLSARQL
QRLFVARLGAAPAQIHATRRLLLAKQLLTETALPVTDVAMAAGYNSLRRFNAAFVEGCGM
PPTAIRRQRGTLADGALTLRLGYRPPLDFSAMLGFLRRRCIPGIEQIDDNSYQRVIGPVE
RPSVIRVTADPRRPELLLQLGQVDPRAIPGIVRRVRRIFDLDADLRIVHATLAQDPLLAR
GIAQRPGLRVPGGWDGFEVAVRAVLGQQVSVAAAITLARRVVDRFGTPLEGMPEGLDRQF
PSPAQLAEAPLEGIGLPRTRAATVRAVATAVAEGRLDFHAGQRLDSFIERCVALPGIGPW
TAHYIALRALALPDAFPAGDLVLQQVLGGDTRLSERATEARSQAWRPWRAYAVLHLWHLA
TSASE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccctgcccctggactacgccgcctgcgaaagcgctcgcctggcccgcgat
gcgcgcttcgacggggtattcttcaccgccgtgcgcagcaccgggatctactgccgcccg
gtctgcccggcaccggcgccgaaaccggccaacgtggattactaccccaccgccgccgca
gccgccgcggccggcttccggccctgcctgcgctgccgcccggagctggccccggaagcg
caggacgcgctgagcaacgaaaccctgcagcgcgcgctcgccctgatccacgacggctac
ctgcaggacgccgcggtcggcgacctggccgctcggctgggcctgagcgcgcgacagctg
cagcgcctgttcgtggcccggctcggcgccgctccggcgcagatccatgccacccggcgg
ctgctgctggccaagcagctgctgaccgaaaccgcgctgccggtcaccgacgtggccatg
gccgccggctacaacagcctgcgccgcttcaacgccgcgttcgtggaaggctgcggcatg
ccgcccaccgcgatccgccgccagcgcggcacgctcgccgacggcgcgcttacgctgcgc
ctgggctaccggccaccgctggatttcagtgcgatgctcgggttcctgcgccggcgctgc
attccgggcatcgagcagatcgatgacaacagctaccagcgcgtgatcgggccagtcgag
cgcccctcggtgatccgcgtgaccgccgatccgcgccggcccgaactcctgctgcagctg
ggccaggtcgacccgcgcgcgattccgggcatcgtgcgccgggtgcggcgcatcttcgac
ctcgatgccgatctgcgcatcgtgcacgccaccctggcgcaggacccgctgctggcgcgc
ggcatcgcgcagcgcccgggactgcgcgtgccggggggctgggacgggtttgaagtggcg
gtgcgcgcggtgctcggccagcaggtcagcgtcgccgcggcgatcaccctggcgcgtcgg
gtggtcgaccgcttcggcaccccgctggagggaatgcccgagggcctggaccggcagttc
ccgagcccggcgcagctggccgaggcgccgctggaaggcatcggcctgccgcgcacgcgt
gcggccacggtgcgcgcggtggccacggcggtcgccgaaggccgcctggatttccatgcc
ggccagcgcctggacagtttcatcgaacgctgcgtggcgctgcccgggatcgggccgtgg
accgcgcactacatcgcgctgcgcgcgcttgcgctgcccgatgccttccccgccggcgac
ctggtgctgcagcaggtgctcggcggcgacacccgcctgagcgaacgcgccaccgaggcc
cgttcgcaggcctggcgaccctggcgtgcctacgccgtactgcacctgtggcatctggcc
acgtccgcttcggagtaa
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