Stenotrophomonas aracearum: PDM28_06250
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Entry
PDM28_06250 CDS
T10111
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sarc03009
]
PDM28_06250
Enzymes [BR:
sarc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
PDM28_06250
Ribosome biogenesis [BR:
sarc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PDM28_06250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WNH49904
UniProt:
A0ABY9YHW4
LinkDB
All DBs
Position
1349964..1350686
Genome browser
AA seq
240 aa
AA seq
DB search
MTTRLNKHIAETGFCSRREADRLIGERRVTVNGRPAGAGAVVGEGDMVLVDGQPLRAREA
KKAGGRRHVYIALNKPVGITCTTESAVKGNIVDFVGHEQRIFPVGRLDKDSEGLILMTSN
GDIVNQILRAENNHQKEYMVAVNKPVTDEFLRGMARGVRIRDETTLPCRTSRIAKFGFRI
VLQQGLNRQIRLMAAAFDYRVTQLRRVRIDNVKLGALKPGQWRNLTDAELKGLLPKQLDW
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccgactcaacaaacatatcgccgaaaccggcttctgctcccggcgtgaagcc
gaccgcctgatcggcgagcgccgcgtcaccgtcaacggccgcccggccggggccggcgcg
gtggtcggcgagggcgacatggtgctggtcgacggccagccgctgcgcgcccgcgaggcg
aagaaggccggcggccgccgccatgtgtacatcgcgctgaacaagccggtgggcatcacc
tgcaccaccgaaagcgccgtgaaggggaacatcgtggacttcgtcggccacgagcagcgc
atcttcccggtcggccgcctggacaaggactccgaaggcttgatcctgatgaccagcaac
ggcgacatcgtcaaccagatcctgcgcgccgagaacaaccaccagaaggaatacatggtg
gcggtgaacaagccggtgaccgatgagttcctgcgtggcatggcccgcggcgtgcgcatc
cgcgacgaaaccacgctgccgtgccggacctcgcgcatcgccaagttcggcttccggatc
gtgctgcagcagggcctgaaccggcagatccgcttgatggccgccgcgttcgactaccgc
gtgacccagctgcgccgggtgcggatcgacaacgtcaagctgggcgcgctcaagcccggg
cagtggcgcaacctgaccgacgccgagttgaagggcctgctgcccaagcagctggactgg
taa
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