Stenotrophomonas aracearum: PDM28_06285
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Entry
PDM28_06285 CDS
T10111
Symbol
smrA
Name
(GenBank) multidrug efflux ABC transporter SmrA
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDM28_06285 (smrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_06285 (smrA)
Transporters [BR:
sarc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PDM28_06285 (smrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_16
MMR_HSR1
AAA_22
AAA
AAA_30
HUTI_composite_bact
AAA_29
AAA_33
NTPase_1
AAA_21
AAA_7
AAA_5
AAA_18
Septin
CyanoTRADDas_TM
Motif
Other DBs
NCBI-ProteinID:
WNH49911
UniProt:
A0ABY9YGF6
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Position
1357099..1358934
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AA seq
611 aa
AA seq
DB search
MFRWFESLIPVFPPTDARMPPRRVLPFYIHYLRPVWPVLLATLIAGLLLALVEVAMFDFL
GRIVDMVSEQPDAGFFARHADTLLWMAAITLVARPVLVGLHNLLVNQAIVPGLSNRSRWL
MHNYVVRQSLSFFQNDFAGSMANRVMQTGTSLRESAVQMVDSLWYIVVYTGTALYLFAQA
DWRLMIPLVLWLGAYVAIMVYFVPRAKQRAWIASEARSKAMGRIVDGYTNIPTLKLFAHG
GREQAYVAEAIEELAVKHRRQTRITTSLDLTISIVNGFLIAGTCGLALWLWSHGNITVGS
ITLATGLVIRIHNMSGWIMWTINGIFEDIGTVQDGITTISQPLSVQDRVDAVPLVVGEGG
VQFDDIHFHYGKKGGVIAGLDLVVKPGEKIGLVGPSGAGKSTLVNVLLRLYDLESGQIRI
DGQDIAAVTQESLRRQIGVVTQDTSLLHRSIRDNLLYGRPDATEEQLHAAVAKARAASFI
ETLRDGEGRQGYDAHVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSEVEAA
IQENLDELMAGKTVIAIAHRLSTIARMDRLVVMDQGRIVETGTHAELVAAGGLYARLWAR
QTGGFVAADEA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctggttcgagtcgctgattccggtgtttccgccgaccgacgcgcgcatgccg
ccgcgccgggtgctgccgttctacatccactacctgcgcccggtctggccggtgctgctg
gcgacgctgatcgcggggttgctgctggcgctggtggaagtggccatgttcgatttcctg
ggccgcatcgtggacatggtcagcgagcagccggacgcgggcttcttcgcgcggcatgcc
gatacgctgctgtggatggcggcgatcacgctggtcgcgcggccggtgctggtggggctg
cacaacctgctggtgaaccaggcgatcgtgccgggcctgagtaaccgttcgcgctggttg
atgcacaactacgtggtgcggcagagcctgtcgttcttccagaacgactttgcgggcagc
atggccaaccgggtgatgcagacggggacgtcgctgcgcgagtcggcggtgcagatggtg
gattcgctgtggtacatcgtggtctacacgggcacggcgctgtacctgttcgcgcaggcg
gactggcggctgatgattccgctggtgctgtggctgggggcgtacgtggcgatcatggtg
tacttcgtgccgcgcgcgaagcagcgggcgtggatcgcgtcggaagcgcgttcgaaggcg
atgggccggatcgtggacggctacacgaacattccgacgttgaagctgttcgcgcatggc
gggcgcgaacaggcgtacgtggcggaggcgatcgaggagctggcggtgaagcatcgccgg
cagacgcggatcacgacgagcctggacctgaccatttcgatcgtgaacgggttcctgatc
gcggggacctgcgggttggcgctatggctgtggagccacggcaacatcacggtggggtcg
atcacgctggcgacggggctggtgatccgcatccacaacatgtcgggctggatcatgtgg
acgatcaacgggattttcgaggacatcgggacggtgcaggacgggatcacgacgatctcg
cagccgctgagcgtgcaggaccgcgtggacgcggtgccgctggtggtgggcgagggcggg
gtgcagttcgacgacatccacttccactacggcaagaagggcggggtgatcgcggggctg
gacctggtggtgaagccgggcgagaagatcgggctggtgggtccgtcgggcgcgggcaag
tcgacgctggtgaacgtgctgctgcggctgtacgacctggaaagcgggcagatccgcatc
gacgggcaggacattgccgcggtgacgcaggaaagcctgcgccggcagatcggggtggtg
acgcaggacacgtcgctgctgcatcggtcgatccgcgacaacctgttgtacggccggccg
gatgcgacggaggagcagctgcacgcggccgttgcgaaggcgcgtgctgccagtttcatc
gagacgctgcgcgacggcgaaggccggcaggggtacgacgcgcatgtaggcgagcgcggg
gtaaaactttcgggtggtcagcggcagcgcatcgcgatcgcgcgggtgctgctgaaggat
gcgccgatcctggtgctggatgaggcaacctcggcactggattcggaagtggaagcggcg
atccaggagaacctggacgagctgatggcaggcaagacggtgatcgccattgcacaccgc
ctgagcacgatcgcgcgcatggaccggctggtagtgatggaccagggccggatcgtggaa
accggcacgcatgccgaactggtggctgccggtggcctgtatgcgcgcctgtgggcgcgg
cagaccggcgggtttgttgcggcggacgaagcgtaa
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