Stenotrophomonas aracearum: PDM28_07045
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Entry
PDM28_07045 CDS
T10111
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00541
Biosynthesis of various nucleotide sugars
sarc01100
Metabolic pathways
sarc01250
Biosynthesis of nucleotide sugars
Module
sarc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PDM28_07045 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sarc01005
]
PDM28_07045 (kdsB)
Enzymes [BR:
sarc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
PDM28_07045 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
sarc01005
]
Lipid A
PDM28_07045 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WNH50048
UniProt:
A0ABY9YI69
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Position
1525796..1526593
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AA seq
265 aa
AA seq
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MSQPVDFVVAIPARYAASRLPGKPLRLLGGTPLVRHVAERALQAGAREVWVATDDTRIAD
ALQGLPTVKVAMTDPGHASGTDRLAECARQAGWSDDTLVVNLQGDEPFAPADGIRAVAEA
LVYSGADMATLATPVEDAETLFDPNVVKVVRQQNLDALYFSRAPIPWDRDGFARSRDSLS
GPHWLRHIGIYAYRAGFLQRFAALPPGRLEQLESLEQLRVLEAGHRLSVALSPAAFPPGI
DTPADLERAEAWLARRQIDGGTTVA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcccgtcgatttcgttgtcgccattccggcgcgctacgccgcctcgcgcctg
cccggcaaaccgctgcggctgctcggcggcaccccgctggtgcggcacgtggccgaacgc
gccctgcaggccggggcacgcgaggtctgggtggccaccgatgacacccgcatcgccgac
gcgctgcagggcctgcccacggtgaaggtggcgatgaccgaccccggccacgcctcgggc
accgaccgcctggccgagtgcgcgcggcaggcgggctggtcggacgacaccctggtggtc
aacctgcagggcgacgaaccgttcgcgccggccgacggcatccgcgccgtggccgaagcg
ctggtctacagcggggccgacatggccaccctggcgaccccggtcgaagacgccgaaacc
ctgttcgacccgaacgtggtcaaggtggtgcgccagcagaacctggacgcgctgtacttc
agccgcgcgccgatcccgtgggaccgcgacggcttcgcgcgctcgcgcgacagcctgtcc
gggccgcactggctgcgccacatcggcatctatgcctaccgcgccgggttcctgcagcgc
ttcgccgcgctgccgccgggccggctcgaacagctggagtcgctggagcagctgcgggtg
ctggaggccgggcaccgcctgagcgtggcgctgtccccggcggcgttcccgccgggcatc
gacaccccggccgacctggagcgtgccgaggcctggctggcccgtcgtcaaattgacggt
ggcacgacggttgcatga
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