Stenotrophomonas aracearum: PDM28_07270
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Entry
PDM28_07270 CDS
T10111
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sarc03009
]
PDM28_07270 (rlmE)
Enzymes [BR:
sarc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
PDM28_07270 (rlmE)
Ribosome biogenesis [BR:
sarc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PDM28_07270 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
SUV3_C
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
WNH50085
LinkDB
All DBs
Position
1563027..1563659
Genome browser
AA seq
210 aa
AA seq
DB search
MASRSKSSQRWLKEHFADPFVKKAQAEGMRSRAAYKLEELLERDRLLKPHMVVVDLGAAP
GGWSQQVRRQIGASGRVLALDILEMPPLAGVEFLHGDFREQAVLSQFEAMLGDTPVDLVL
SDMAPNKSGVDAVDQPRMMHLAELAMEFSDNHLKPGGAFLIKLFQGVGFDDYVREMRRRF
DKVVIRKPEASRKRSPEVYALGQGKRAQIK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgcagcaaaagcagtcaacgctggttgaaagagcacttcgccgatcccttc
gtgaagaaggcccaggccgaaggcatgcgctcgcgcgcggcctacaagctggaggagctg
ctcgagcgcgaccggctgctgaagccgcacatggtggtggtcgacctgggcgccgccccg
ggcggctggtcgcagcaggtgcggcgccagatcggcgcttccggtcgggtactcgcgctg
gacatcctggagatgccgccgctggccggcgtcgagttccttcacggcgacttcagggag
caggccgtcctatcgcagtttgaagccatgctcggggacaccccggtagaccttgtgctc
tcggatatggcccccaataagagtggagtggacgcggtcgaccagccgcggatgatgcac
ctggccgagctggcgatggagttttccgacaaccatctcaagccgggtggcgcgttcctg
atcaagctgttccagggcgtgggctttgacgactacgtgcgcgagatgcggcgccggttc
gacaaggtcgtgatccgcaagcctgaagcctcccgtaagcgctcgcccgaggtgtacgcc
ctggggcagggcaaacgcgcccagatcaagtaa
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integrated database retrieval system
