Stenotrophomonas aracearum: PDM28_07490
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Entry
PDM28_07490 CDS
T10111
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00030
Pentose phosphate pathway
sarc01100
Metabolic pathways
sarc01120
Microbial metabolism in diverse environments
sarc01200
Carbon metabolism
Module
sarc_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
PDM28_07490 (edd)
Enzymes [BR:
sarc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
PDM28_07490 (edd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
WNH50121
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Position
complement(1601706..1603622)
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AA seq
638 aa
AA seq
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MSLHPTLHAITERIVKRSAASRAAYLAGIDAALRDGPFRSRLSCGNLAHGFAACGPTDKS
RLRGGVTPNLGIITAYNDMLSAHQPFEHYPEILRETARSLGATAQVAGGVPAMCDGVTQG
RGGMELSLFSRDVIAQSTAIGLSHDMFDSTVYLGVCDKIVPGLLIGALAFGHLPAIFLPA
GPMTPGIPNKQKAEVRERYAAGQATREELLEAESASYHGVGTCTFYGTANSNQTLLEAMG
VQLPGASFVNPETPLRDALTRHAAARALEISALGDDFRPLGRLIDERAIVNAVVTLMATG
GSTNHTIHWIAVARAAGIVLTWDDMDQLSQLVPLLARVYPNGEADVNRFAAAGGTAFVFR
ELMDAGLMHADLVTVAEGGMRQYTQDPALREGGLTWIDGIVESADREVVRGVAEPFEAQG
GLRLLRGNLGRSLIKLSAVKPQYRTIEAPAVVVDAPQVLNKLHAAGLLPQDFVAVVRYQG
PRANGMPELHSLAPLLGLLQNQGRRVALVTDGRLSGASGKFPAAIHMTPEASRGGPLARM
REGDMIRLDGEAGTLEVLVDAAEWAARELAPNTAPAAHDLGRNLFAMNRRLVGPADQGAI
SISCGPATDEGDVWNYDAEYELGHDAAAALAPHEAKDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaccccaccctccatgccatcaccgagcggatcgtcaagcgcagcgctgcg
tcgcgcgcggcgtacctggccggtatcgacgctgcgctgcgcgacggtccgttccgttct
cgcctgagctgcggcaacctggcgcacggtttcgctgcgtgcgggccgaccgacaagagc
cgcctgcgcggcggcgtgacgccgaacctgggcatcatcacggcgtacaacgacatgctg
tcggcgcaccagccgttcgagcattacccggaaatcctgcgcgagacggcgcgttcgctg
ggtgcgacggcgcaggtggccggtggcgtgccggcgatgtgcgacggtgtgacgcagggc
cgtggcgggatggagctgtcgctgttctcgcgcgatgtgatcgcgcagtcgacggcgatc
gggctgagccatgacatgttcgacagcacggtctacctgggcgtgtgcgacaagatcgtg
ccggggctgttgatcggggcgctggcgttcggccatctgccggcgatcttcctgccggcc
ggtccgatgacgccgggcattccgaacaagcagaaggcggaggtgcgcgagcgttacgcg
gcgggccaggcaacgcgcgaggagctgctggaggcggagtcggcgtcgtatcacggcgtg
ggtacgtgcacgttctacgggacggccaattcgaaccagacgctgctggaggcgatgggg
gtgcagttgccgggcgcgtcgttcgtgaatccggagacgccgctgcgcgatgcgctgacg
cggcatgcggcggcacgggcattggagatcagtgcgctgggcgatgatttccgtccgctg
gggcggttgatcgacgagcgggcgatcgtcaatgcggtggtgacgctgatggcgacgggc
ggttcgaccaaccacacgatccactggatcgcggtggcgcgggcggcgggcatcgtgctg
acgtgggacgacatggatcagctgtcgcagctggtgccgctgctggcgcgggtgtacccg
aacggggaggcggacgtgaaccgtttcgcggcggcgggcgggacggcgttcgtgttccgg
gagctgatggatgcggggctgatgcatgcggatctggtgacggtggccgagggcgggatg
cggcagtacacgcaggatccggcgctgcgcgaaggcgggctgacctggatcgacgggatc
gtggaaagtgcggaccgtgaggtggtgcgcggggtggcggagccgttcgaggcacagggc
gggctgcggctgctgcgcggcaacctgggccgttcgctgatcaagttgtcggcggtgaag
ccgcagtaccggacgatcgaggcgccggcggtggtggtggatgcgccgcaggtgctgaac
aagctgcacgcggcgggcctgctgccgcaggatttcgtggcggtggtgcgttaccagggt
ccgcgtgcgaacgggatgccggagctgcattcgctggcgccgctgctggggctgctgcag
aaccaggggcgccgggtggcgctggtgacggatggtcgtctgtcgggtgcgtcgggcaag
ttcccggcggcgatccacatgacgccggaggcgtcgcgtggcggtccgctggcacgcatg
cgggaaggcgacatgatccgtctggatggtgaagcgggcacgttggaagtgctggtggat
gcggcggagtgggcagcacgcgagctggcgccgaacacggcgccggcggcgcacgatctg
ggccgcaatctgttcgcgatgaaccgccgtctggtgggtccggcggaccagggcgcgatt
tcgatttcgtgcgggccggcgaccgacgaaggcgatgtctggaattacgacgcggagtac
gagctggggcatgacgctgctgcagcgcttgcgccgcatgaagccaaagatgcctga
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