Stenotrophomonas aracearum: PDM28_07655
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Entry
PDM28_07655 CDS
T10111
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarc03400
]
PDM28_07655
Enzymes [BR:
sarc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PDM28_07655
DNA repair and recombination proteins [BR:
sarc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PDM28_07655
Prokaryotic type
PDM28_07655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WNH50153
UniProt:
A0ABY9YIJ2
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All DBs
Position
1635388..1636797
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AA seq
469 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALEAGHTPVPVYIHAPQEEGDWAPGAASNIWLHRSLAA
LDADLRERGSSLVLRQGDSEAELQALIAETGAVAVYWNRKYEPATQPRDARIKRELREQG
IEADSHNGSLMFEPWDIATLQGGPYKVFTPFWRNALTRMNLPAPLPVPERLPSHKATGVS
LDALQLTPTLDWDRQFWDHWQPGEAGADEALTVFVDGALNGYRQQRDLPDRVGTSLLSPH
LHFGEISPWQIVRRLEKERSASRDADIDGYIRELGWREFSYHLMHHFPQTPEQNLNPRFA
TFKWAAPNATQLQAWQQGRTGVPIVDAGLRELWATGYMHNRVRMIVASFLCKHMRQHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRIFNPVTQSQKFDPHARYITRWVPE
LAPLPVKARFAPWQSAALLAELAPSYPAVPLVDLAAGREAALAAYRHTG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagctctggtctggtttcgtcgcgatctgcgccttcaggacaatccggcgctg
caggccgcgcttgaggccggacacacgcccgtaccggtgtacatccatgcaccgcaggaa
gagggcgactgggcacccggcgcagcctccaacatttggttgcaccgctcgctggcggcg
ctggatgccgacctgcgcgaacgcggctcgtcgctggtgctgcgccagggcgacagcgaa
gccgagctgcaggcgctgattgccgagaccggcgcggtggcggtgtactggaaccgcaaa
tacgagccggccacccagccacgcgatgcgcggatcaagcgcgagctgcgcgagcagggc
atcgaagcagacagccataacggcagcctgatgttcgaaccctgggacatcgccaccctg
caaggcggcccctacaaggtgttcaccccgttctggcgcaacgcgctgacccgcatgaac
ctgcccgcaccgctgccggtgccggagcgcctgccgtcgcacaaggccacgggcgtcagt
ctcgacgcgttgcagctgacccccacgctcgactgggaccggcagttctgggaccactgg
cagcccggcgaagcgggcgccgacgaggcgctgacggtgttcgtcgacggcgcgctgaac
ggctatcgccaacagcgcgacctgcctgatcgggtagggacgtcgctgctgtccccgcac
ctgcacttcggcgaaatctcgccgtggcagatcgtgcgccggctggagaaagagcgcagc
gccagccgtgacgccgacatcgacggctacatccgcgaactgggctggcgcgagttctcg
taccacctgatgcaccacttcccgcagacaccggaacagaacctcaatccgcgtttcgcc
accttcaaatgggctgctcccaacgcgacgcagctgcaggcctggcagcagggccgcacc
ggcgtgccgatcgtcgacgccggcctgcgcgaattgtgggccaccggctacatgcacaac
cgcgtgcgcatgatcgtcgccagtttcctgtgcaagcacatgcgccagcactggctgcac
ggcgcgcgctggttctgggacacgctggtggatgccgacctcgccaacaacaccatgggc
tggcagtgggtggccggaaccggggcagatgcggcaccgtacttccgcattttcaacccg
gtcacgcagtcgcagaagttcgatccgcacgcgcgctacatcacgcgctgggtgccggaa
ctggcgccgttgccggtcaaggcgcgcttcgcgccgtggcagtcggcggccctgctggcc
gagctggcgccgtcctatcccgccgtaccgctggtggacctggccgccggacgggaggcg
gccttggccgcgtatcgccacacgggctag
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