Stenotrophomonas aracearum: PDM28_08030
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Entry
PDM28_08030 CDS
T10111
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
PDM28_08030 (lapB)
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Paralog
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Motif
Pfam:
Zn_ribbon_LapB
TPR_2
TPR_14
CFAP70_TPR_C
TPR_16
TPR_19
TPR_7
TPR_12
ARM_TT21_C
CFAP70_mid_TPR
DDE_Tnp_IS66
DUF7129
TPR_SusR
Motif
Other DBs
NCBI-ProteinID:
WNH50224
UniProt:
A0ABY9YH89
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Position
1722808..1723986
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AA seq
392 aa
AA seq
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MEFVSEWFWFFLFLPLAAVSGWVIGRRGGQRHGDNQVSRLSSTYFRGLNYLLNEQPDKAI
ELFLHIAELDKETFETQVALGHLFRRRGEVDRAIRLHQGLVNRTDLSDAQRVQALLALGE
DYMKSGLLDRAETVFSELAQIDQRAPQALKHLIGIYQAERDWEKAIDNATRYEEVTGEPM
GKLVGQFECELAERFRGAGKIDEARAAIARAYQADAMSVRAGIIEGRLETDSGNAEAAVR
AFERAARNDPEYLPEVLQPLMQNYRKVGDLGGARAFLSEMTEHYRGIAPVLALTQLMEEQ
EGVAPARAYLGRQLKDRPSVRGESALIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRC
TRCGFGARTHHWQCPSCKEWGTVKPLLNYAVL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgtctccgagtggttctggtttttcctgttcctgccgctggcagcggtgtcc
ggctgggtgatcggccggcgtggcgggcagcgccacggcgacaaccaggtcagccgtctc
tcaagcacttatttccgcggcctgaactacctgctcaacgagcagccggacaaggccatc
gaactgttcctgcacattgcggagctggacaaggaaacctttgaaacccaggttgcgctg
ggccacctgttccgccgccgaggcgaggtcgaccgggccatccgcctgcaccaggggctg
gtcaaccgtaccgacctgagcgacgcccagcgcgtccaggccctgctggcgctcggcgag
gactacatgaagtccggcctgctggaccgcgccgaaaccgtgttctccgaactggcccag
atcgaccagcgcgccccgcaggcgctcaagcacctgatcggcatctaccaggccgagcgc
gactgggaaaaggcgatcgacaacgccacccgctacgaggaagtcaccggtgagccgatg
ggcaagctggtcgggcagttcgaatgcgagctggccgagcgcttccgtggcgccggcaag
atcgacgaggcgcgtgcggcgattgcccgcgcctaccaggccgacgccatgtcggtccgc
gctggcatcatcgaaggtcgcctggaaaccgattcgggcaatgccgaagcggcggtgcgc
gccttcgagcgcgcagcccgcaacgatcccgagtacctgcccgaggtgctgcagccgctg
atgcagaactaccgaaaggtgggcgacctgggcggcgcgcgcgcgttcctctctgaaatg
accgagcactaccgcggcatcgccccggtcctggcattgacccagttgatggaagagcag
gaaggcgttgcccccgcgcgcgcctacctgggccgccagctcaaggatcgtccgtcggtc
cgtggcgagtctgccctgatcgacctgaccctggccgagggcgccgattccactgcgacc
ctgcacgacctcaagcacatcaccgaccagctgctggtccgcaatcccgcctaccgctgc
acccgctgcggcttcggcgcgcgcacccatcactggcaatgcccgagctgcaaggagtgg
ggaacggtcaagccgctgctgaactacgcggtactctga
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