Stenotrophomonas aracearum: PDM28_08240
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Entry
PDM28_08240 CDS
T10111
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDM28_08240 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sarc01007
]
PDM28_08240 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarc03016
]
PDM28_08240 (hisS)
Enzymes [BR:
sarc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
PDM28_08240 (hisS)
Amino acid related enzymes [BR:
sarc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PDM28_08240 (hisS)
Transfer RNA biogenesis [BR:
sarc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PDM28_08240 (hisS)
Prokaryotic type
PDM28_08240 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
HGTP_anticodon2
tRNA-synt_2
GARS_N
tRNA-synt_2d
DUF5797
Motif
Other DBs
NCBI-ProteinID:
WNH50264
UniProt:
A0ABY9YJ02
LinkDB
All DBs
Position
1771499..1772896
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AA seq
465 aa
AA seq
DB search
MIKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETE
RQVYFVQSTGALANAAEAGDKSLPELALRFDLTVPLARYVAEHEHDLTFPFRRYQMQRVY
RGERAQRGRFREFYQCDIDVIGKDGLSTRYDAEVLAVIHAVFSELRIGDFSVQLNNRKLM
RGFFESLGVADGERQMAVLREVDKLDKRGPDYVRETLTGEGFAIPAEQVDRILAFVAVRS
SSHADALAQLDALVADGNASETLQLGVAELREVLQLVKALGVPETAYCLNFSIARGLDYY
TGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLTRLFWQLREAGLIAG
IEDSSVHALVALMDDNGLSDSLDIARRLRAGGINAEVQMEPKKIGKQFQYAAKAGIRFVV
LAGEDELARGVVAVKDLLREQQFEVARDELASALQVELEQTRAMA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagccccgtacgccgcccggcatcatggaattgctgccgcgcgagcagatcgcg
ttccagcgcatgctggacgtcatccgccgcaattacgagcggttcgggttcctgccggtg
gaaacgccggtgttcgagctgtcggacgtgctgcttaccaagtccggcggcgaaaccgag
cgccaggtgtatttcgtgcagtccaccggggcgctggccaatgcggccgaggcgggcgac
aagagcctgccggaacttgcgctgcgcttcgacctgacggtgccgctggcgcgctacgtg
gccgagcacgagcacgacctgaccttcccgttccgccgttaccagatgcagcgggtgtac
cgtggcgagcgcgcgcagcgcggccgtttccgcgagttctaccagtgcgacatcgacgtg
atcggcaaggacggcctgagcacgcgctatgacgcggaagtgctggcggtgatccacgcg
gtgttctcggaactgcgcatcggtgatttctcggtgcagctgaacaaccgcaagttgatg
cgcgggttcttcgagagcctgggcgtggccgacggcgagcgccagatggcggtgctgcgc
gaggtcgacaagctggacaagcgcggcccggactacgtgcgcgaaacgctgaccggtgaa
ggctttgcgattcctgccgaacaggtggaccgcatcctggcgttcgtggcggtgcgttcg
agcagccacgccgatgcgctggcgcagctggacgcgctggtggccgacggtaacgcgagc
gaaacgctgcagctgggtgtggccgagctgcgcgaggtgctgcagctggtgaaggcgctg
ggcgtaccggaaacggcgtactgcctgaacttctcgattgcccgcggcctggattactac
accggcacggtgtacgaaaccacgctgaccgaccacccgcagatcggttcgatctgttcg
ggcggccgttacgaggacctggccagccactacagcaagtcgaagctgccgggcgtgggc
atttcgatcgggctgacccgtctgttctggcagctgcgcgaggcaggcctgattgccggc
atcgaagacagcagcgtgcatgcgctggtggcgctgatggacgacaacggcctgtctgat
tcgctggacatcgcacgccgcctgcgcgcgggcggaatcaacgcggaagtgcagatggag
ccgaagaagatcggcaagcagttccagtacgcggccaaggcgggcatccgtttcgtggtg
ctggccggcgaagacgagctggcacgcggcgtggtggcggtgaaggatcttctgcgcgag
cagcagttcgaagtcgcccgcgatgagctcgccagtgccttgcaggtggagttggagcag
acccgcgctatggcgtga
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