Stenotrophomonas aracearum: PDM28_08630
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Entry
PDM28_08630 CDS
T10111
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc02020
Two-component system
sarc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDM28_08630
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PDM28_08630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sarc03021
]
PDM28_08630
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sarc02035
]
PDM28_08630
Transcription machinery [BR:
sarc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PDM28_08630
Bacterial motility proteins [BR:
sarc02035
]
Flagellar system
Flagellar assembly proteins
Stator
PDM28_08630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
WNH50337
UniProt:
A0ABY9YHJ7
LinkDB
All DBs
Position
complement(1869085..1869831)
Genome browser
AA seq
248 aa
AA seq
DB search
MKGAAQYKEVQRAAANECIAQHSDLVRRIAHHLAARLPASVEVDDLIQAGMMGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAASTIRRLEQSTGRAASAT
EVAAAMDMPLPDYLRLMEDAARGQVLSLESRIEDQGELDTVAQGGPTPQQVLERGEFGRE
LGNAIGLLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVLRLRGRLKIFEA
ADAGLENN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgccgcacaatacaaggaggtgcaacgcgccgccgccaacgagtgcattgcc
cagcactcggacctggtccggcgcattgcccaccacctggccgcgcgcctgccggccagc
gttgaagtggacgacctgatccaggccggcatgatgggcctgatcgaggcgtcgcgcagc
tacgacgccgaccagggcgcctcgttcgaaacctacgcctcgatccgcatccgcggctcg
atgatcgacgagatccgccgcggcgactgggtgccgcgctcggtgcaccgccgtgcgcgc
gacgccgcctccaccatccgccgcctggagcagagcaccggccgcgccgccagcgccacc
gaagtggccgccgcgatggacatgccgctgcccgactaccttcgcctgatggaagacgcc
gcgcgcggccaggtgctgagcctggagtcgcggatcgaagaccagggcgagctggacacc
gtggcccagggcggcccgaccccgcagcaggtgctcgagcgcggcgaattcggccgcgag
ctgggcaacgcgatcggcctgctgcccgagcgcgaacagctggtgctgtcgttgtactac
gagcaggaactgaacctgaaagagatcggcgcagtgctcggggtcagcgagtcgcgcgtc
tgccagatccatggccaggccgtgctgcgcctgcgtggccgattgaagatcttcgaggcg
gccgacgccggcctcgagaacaactga
DBGET
integrated database retrieval system
