Stenotrophomonas aracearum: PDM28_10020
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Entry
PDM28_10020 CDS
T10111
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarc03000
]
PDM28_10020
Transcription factors [BR:
sarc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PDM28_10020
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
AbiEi_4
HTH_23
HTH_31
HTH_3
HTH_17
HTH_Tnp_ISL3
HTH_28
HTH_DeoR
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WNH47048
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Position
2178998..2180056
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AA seq
352 aa
AA seq
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MDKPKKSVRRKTSGVTIDEVAALAGVSPMTVSRAVNQGNVREETRERVMRAVRKLGYTPN
VAASSLAAAQHTRIALIYANPSGAYLSELLVGLLRVASNAPVQLTIDYWENMDAEAERKA
ARSLASRVDGVILPPPLCESAAAVGELVKARIPVVAIASGRQGDGISCVRIDDFHAGKEM
AEHLIQHGHTRIGFICGRDDLSASARRYDGFVTALHEAGLEVDPELVQRGNYTYRSGLGA
AELLLAHGNPPTAIFASNDDMGAAAISVAHRRGLDVPRDLTVVGFDDTSAATTVWPELTT
IHQPIAAMADAAIDILLRTIRNRNDEARPLTDHVLPHRLVERDSVARPPRGR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagccgaagaaatcggtccgccgcaaaaccagcggcgtgacgatcgacgaggtg
gcggcgctggcaggcgtttcgccgatgaccgtgtcgcgggccgtgaaccagggcaacgtg
cgcgaagagacccgcgaacgcgtgatgcgcgcggtgcgcaagctgggctacacgcccaat
gtcgcggccagttcgctggcggccgcgcagcacacccgcatcgcgctgatctacgccaat
ccgagcggtgcctacctgagtgaacttctggtcggcctgctgcgggtggcctccaatgcg
ccggtgcagctgaccatcgactactgggaaaacatggatgccgaggccgagcgcaaggcc
gcgcgcagcctggccagccgggtcgacggcgtgatcctgccgccgccgctgtgcgagtcc
gcggccgccgtgggcgagctggtaaaggcgcgcatccccgttgtggcgattgcgtccggc
cgccagggtgatggtatttcctgcgtgcgcatcgacgacttccacgccggcaaggaaatg
gccgagcatctgatccagcacgggcatacccgcatcggcttcatctgcggacgcgacgac
ctcagtgccagcgcccgccgctacgacggttttgtcaccgcgctgcacgaggccgggttg
gaggtcgaccccgaactggtccagcgcggcaactacacctaccgctccgggctgggcgcc
gcagagctgctgctggcgcatgggaacccgcccaccgcgattttcgccagcaacgacgac
atgggtgcagccgccatttcggtcgcgcaccggcgcgggttggacgtgccccgcgacctg
accgtggtgggcttcgatgacacctcggccgccaccacggtgtggccggaactcaccacc
atccaccagcccattgcggcgatggccgacgcagccatcgacatcctgctgcgcaccatc
cgcaaccgcaacgacgaggcgcggccgcttaccgaccatgtgctgccgcaccggttggtg
gagcgcgattcggtggcgcgcccgcccagaggtcggtag
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