Stenotrophomonas aracearum: PDM28_10965
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Entry
PDM28_10965 CDS
T10111
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00330
Arginine and proline metabolism
sarc01100
Metabolic pathways
sarc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PDM28_10965
Enzymes [BR:
sarc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PDM28_10965
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WNH47232
LinkDB
All DBs
Position
complement(2409034..2411322)
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AA seq
762 aa
AA seq
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MYFKSLDYPIIVIDDDYESPRIGGILIRALVDELRGSDQRVLCGLTLADAQAGARTYVAA
SAVLISIDGTEDKPGEFQRLLGFLREQSARRAGLPVFLYGERRTIEKVPSKLLKYIHGYI
FLFEDTKSFISRQVMRAADDYMQQLLPPFFKALIHHTADSNYSWHTPGHAGGVAFTKSPV
GRAFHQFYGENTLRSDLSISVPELGSLLDHSGPIKAAENEAAANFGADHTFFVTNGTSTA
NKIVWHGTVGRGDVVFVDRNCHKSLLHALIMTGGVPVFFTPSRNAHGIIGPISLDQFTPE
ALQQAIAANPLASKAYKAGSKPRIAVVTNSTYDGLCYNAEKIAEEIGSAVDFLHFDEAWY
AYAAFHPFYENHYGMAKGKPREQDAIIFTTHSTHKLLAAFSQASMIHVRNAATRDLDAER
FNEAFMMHTTTSPHYGVIAACDVASKMMEGAAGESLVQEMHDEAIAFRRAMLHVREDLGR
DDWWFSVWQPDKLERSLAKGDAPAPLVAKREEWYLQPDAHWHGFDGLVEDYVLIDPIKVT
LLTPGLSIDGDLGELGIPAAVLSKFLWTRGITVEKTNLYSVLFLFSMGITKGKWSTLVTE
LMAFKELFDANAPLTRALPDLAADYPQAYAGWGLRDLCLALHAFNREFAVAQVMREMYVD
LPEPVMTPAEAYDHLVRGQIERVDIEAISGRIAGTMLVPYPPGIPTIMPGERFGASDEPI
IQSLRIAREQNARFPGFESDVHGLIIDRDGDVPSYKVEVLKT
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgtacttcaagtcactggattacccgatcatcgtcatcgacgacgactacgagtccccg
cgcattggcggcatcctgatccgcgcgctggtcgacgagctgcgtggcagcgaccagcgc
gtgctgtgcggcctgaccctggccgatgcacaggctggcgcgcggacctacgtggccgcc
tcggcggtgctgatctccatcgacggcaccgaggacaagcccggcgagttccagcgcctg
ctgggcttcctgcgcgagcagagtgcccggcgcgcgggcctgccggtgttcctgtacggt
gagcgccgcaccatcgagaaggttccgagcaagctgctcaagtacatccacggctacatc
ttcctgttcgaggacaccaagagcttcatttcccggcaggtgatgcgcgctgccgacgac
tacatgcagcagctgctgccgccgttcttcaaggccctgatccaccacaccgcagactcc
aactattcctggcacacgccagggcatgcgggcggggtggcgttcaccaagtcgccggtg
ggacgcgccttccaccagttctacggtgagaacacgctgcgcagcgacctctccatctcg
gtgccagagctgggttcgcttctcgaccacagtgggccgatcaaggcggcggaaaacgaa
gcggcggcgaacttcggtgccgaccacaccttcttcgtcaccaacggcacctccaccgcc
aacaagatcgtctggcatggcacggtggggcggggcgacgtggtgttcgtcgaccgcaac
tgccacaaatccctgctgcacgcactgatcatgaccggtggcgtgcctgtgttcttcacc
cccagccgcaacgcgcacggcatcatcggcccgatcagcctggaccagttcacgccggag
gcgctgcagcaggccatcgcggccaacccgctggccagcaaggcgtacaaagccggttcc
aagccgcgcatcgcggtggtcaccaattcgacctatgacgggctgtgctacaacgcggag
aagattgccgaggaaatcggcagcgcggtggacttcctgcatttcgacgaagcctggtac
gcgtacgcggcgttccatccgttctacgagaaccattacggcatggccaagggcaagccg
cgcgagcaggacgccatcatcttcaccacccattccacccacaagctgttggccgcgttc
tcgcaggcctcgatgatccacgtgcgcaatgcggccacgcgcgacctggatgccgagcgc
ttcaacgaagcgttcatgatgcacaccaccaccagcccgcattacggggtgattgccgcc
tgcgacgtggcctcgaagatgatggagggtgcggccggcgagtcgctggtgcaggaaatg
cacgacgaggccattgccttccgccgggccatgctgcacgtacgcgaagacctgggccgc
gacgactggtggttcagcgtgtggcagccggacaagctggagcgctcgctggccaagggc
gatgcgccggcgccgctggtggccaagcgcgaggagtggtacctgcagccggacgcgcac
tggcatggattcgacgggctggtcgaagactacgtgctgatcgacccgatcaaggtgacc
ctgcttacgcccggcctgtccatcgatggcgatctcggtgaactgggcattccggcggcg
gtgctcagcaagttcctgtggacgcgcggcatcaccgtggagaagaccaacctgtactcg
gtgctgttcctgttctcgatgggcatcaccaagggcaagtggagcacgctggtgaccgag
ctgatggcgttcaaggaactgttcgacgccaacgcgcccttgacccgggcgctgccggac
ctggctgcggactacccccaggcctacgcgggctggggcctgcgcgacttgtgcctggcg
ctgcacgcgttcaaccgtgagttcgccgttgcgcaggtgatgcgggaaatgtacgtggac
ctgcccgagccggtgatgacgccggccgaggcctacgaccacctggtgcgcggacagatc
gagcgggtcgacatcgaagcgatcagtgggcggatcgccggcaccatgctggtgccgtat
ccgccgggtatccccaccatcatgccgggcgaacggtttggtgcgtccgatgagccgatc
atccagtcgctgcgtatcgcccgcgagcagaacgcgcgattcccgggcttcgagtcggac
gtgcacgggcttatcatcgaccgcgacggcgacgtgccgagttacaaggtggaggtgctg
aagacctga
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