Stenotrophomonas aracearum: PDM28_11845
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Entry
PDM28_11845 CDS
T10111
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sarc03032
]
PDM28_11845 (gyrA)
03400 DNA repair and recombination proteins [BR:
sarc03400
]
PDM28_11845 (gyrA)
Enzymes [BR:
sarc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PDM28_11845 (gyrA)
DNA replication proteins [BR:
sarc03032
]
Prokaryotic type
DNA Topoisomerases
PDM28_11845 (gyrA)
DNA repair and recombination proteins [BR:
sarc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PDM28_11845 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WNH47394
LinkDB
All DBs
Position
complement(2597162..2599876)
Genome browser
AA seq
904 aa
AA seq
DB search
MAENAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMNELNAHSN
KPYYKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEARMSRLTHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT
NIPPHNLTESINACIALIENPEIDVDGLMEYIPGPDFPTSGIINGTAGIVAGYRTGRGRV
RIRAKADIEVADNGRESIIVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRREV
VTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPNEARERMLARLWEPGLVG
SMLGAAGAETSRPEDLPKGVGLIEGGYQLTEIQATQILEMRLHRLTGLEQDRLTEEYKQL
LETIAGLIHILEDPDRLLQVIREELVNVRTEFGDERRTEIRHSEEDLDILDLIAPEDVVV
TVSHAGYVKRQPVSAYRAQRRGGRGRSAAATKEEDFIEQLWLVNTHDTLLTFTSSGKVFW
LPVHQLPEAGSNARGRPIINWIPLENGERVQAVLPVREYAEGQYVFFATRNGTVKKTPLS
EFAFRLARGKIAINLDEGDALVGVGLTDGDRDILLFASNGKTVRFGEDRVRSMGRTATGV
RGIKMAKGEEVVSLIVAERAGGNDDENEDDVQVEETAVENGDAVIEGGDDDSMLYILTAT
ENGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVSAVLMGSRDEVLLISDGGTLVRTR
GSEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIDDVEDEAEAAATPVEAAAAPATGDE
NPQG
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacgccaaggaaatcatccaggtcaacctggaagacgagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgccctcccggatgcacgcgacggc
ctcaagccggtgcatcgccgcgtgctgtacgcgatgaacgaactgaacgcgcacagcaac
aagccgtactacaagtcggcgcgtatcgtcggtgacgtcatcggtaagtaccacccgcat
ggcgaccagtcggtgtacgacaccctggtgcgcatggcgcagccgttctcgctgcgctac
atgctggtcgacggccagggtaacttcggttcggtcgacggcgactccgccgcggcgatg
cgttacaccgaagcccgcatgtcgcggctcacccatgagctgatggccgacatcgacaag
gaaaccgtcgatttccagcccaactacgacgaaaaggaactggagccgacggtcatgccg
acccggttcccgaacctgctggtcaacggttcggccggcatcgcggtgggcatggccacc
aacatcccgccgcacaacctgaccgagtcgatcaacgcctgcatcgcgctgatcgaaaac
ccggagatcgacgttgacggcctgatggagtacatcccgggcccggacttcccgacctcg
ggcatcatcaacggtaccgccggcatcgtcgccggttaccgcaccggtcgtggccgggtg
cgcatccgcgccaaggccgatatcgaagtggccgacaacggccgcgaatcgatcatcgtc
accgagatcccgtaccaggtgaacaaggcccggttgatcgagaagatcgccgagctggtc
aaggaaaagaagctcgaaggcatcagcgagctgcgcgatgagtccgacaaggacggcatg
cgcatctacatcgaaatcaagcgcggcgagtcggcggaagttgtgttgaacaacctctac
cagcagacccagatggagtcggtgttcggcatcaacatggtggcgctggtcgacggccgc
ccgcagttgatgaacctcaagcagatgctcgaggcgttcgtgcgccaccgccgcgaagtg
gtcacccgccgtaccgtgttcgagctgcgcaaggcgcgcgcccgtgcccacgtgctggaa
ggtctgaccgttgcgctggccaacatcgacgagatgatcgaactgatcaagacctcgccc
aatcccaacgaagcccgcgaacgcatgctcgcgcgcctctgggaaccgggcctggtcggt
tcgatgctgggtgcggccggcgcggaaacctcgcgcccggaagacctgcccaagggcgtg
ggcctgatcgaaggcggctaccagctgaccgagatccaggccacccagatcctggaaatg
cgcctgcaccgcctgaccgggctggagcaggaccgcctgaccgaagagtacaagcagctg
ctggaaaccatcgccgggctgatccacatcctggaagatccggaccgcctgctgcaggtc
atccgcgaagagctggtcaacgtgcgcaccgagttcggcgacgaacgccgcaccgagatc
cgccacagcgaagaagacctggacatcctcgacctgatcgcgccggaagacgtggtggtg
accgtgtcgcatgccggctacgtcaagcgccagccggtcagcgcctaccgcgcgcagcgc
cgtggcggccgtggccgcagtgcggcagcgaccaaggaagaagatttcatcgaacagctg
tggctggtcaacacgcacgacacgctgctgaccttcaccagttcgggcaaggtgttctgg
ctgccggtgcaccagctgcccgaagccggttcgaatgcgcgtgggcgtccgatcatcaac
tggatcccgctcgagaacggtgagcgcgtgcaggcggtgctgccggtccgtgagtatgcc
gaaggccagtacgtgttcttcgccacgcgcaacggcacggtcaagaagaccccgctgagc
gagttcgcgttccgcctggcgcgcggcaagatcgccatcaacctcgacgagggcgatgcg
ctggtcggtgtcggcctgaccgacggcgaccgcgacatcctgctgtttgcctccaacggc
aagaccgtgcgcttcggcgaagaccgggtccgttcgatgggccgtaccgccaccggcgtg
cgcggcatcaaaatggccaagggcgaggaagtggtcagcctgatcgtggccgagcgtgcc
ggcggcaacgatgacgagaacgaagacgacgtgcaggtcgaagaaaccgcggtcgagaac
ggcgatgccgtgatcgaaggcggcgacgacgacagcatgctgtacatcctgaccgcgacc
gagaacggctacggcaagcgcaccccgctgccggattacccgcgcaagggtcgtggcacc
cagggcgtgatcggcatccagaccaccgagcgcaacggcaagctggtcagcgcggtgctg
atgggctcgcgcgacgaggtcctgctgatctccgacggcggcaccctggtgcgcacgcgt
ggttcggaaatctcgcgcgtgggccgcaacacccagggcgtgaccctgatccgcctgtcc
aaggacgaaaagctgcaggcggtggagcggatggacgcctccatcgacgacgtcgaggac
gaagccgaagcagccgcaactccggtcgaagcggcagcagcaccggccaccggcgacgaa
aatccgcagggttga
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