Stenotrophomonas aracearum: PDM28_12290
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Entry
PDM28_12290 CDS
T10111
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sarc03019
]
PDM28_12290
03016 Transfer RNA biogenesis [BR:
sarc03016
]
PDM28_12290
Enzymes [BR:
sarc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
PDM28_12290
Messenger RNA biogenesis [BR:
sarc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PDM28_12290
Transfer RNA biogenesis [BR:
sarc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PDM28_12290
Prokaryotic type
PDM28_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
WNH47475
UniProt:
A0ABY9Y9U2
LinkDB
All DBs
Position
2696703..2697182
Genome browser
AA seq
159 aa
AA seq
DB search
MRKPLLLLLAILLLVGGLVGIKQLQRAPAPQFAPSLTQPDTGTAPPASAPANPGATAQRS
ADALPAFLPPEARQTLVLIQRGGPYPHRQDGSVFSNREQRLPDRPRGYYREYTVDTPGAG
NRGARRIVTGGTPPTGWFYTDDHYETFRSFEVPPAGSWQ
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacccctactcctcctgctcgccatcctcctgctggtcggcggcctggtcggc
atcaaacagctgcagcgcgcgcctgcgccgcagttcgccccttcgctcacccaacccgac
accggcacggcaccccccgccagcgccccggccaaccccggtgccacggcgcaacgttcc
gccgatgccctgcccgccttcctgccaccggaggcgcgccagaccctcgtgctcatccag
cgcggcgggccgtatccgcaccgccaggacggcagtgttttcagcaaccgcgaacagcgc
ctgcccgaccggccgcgcggttactaccgcgagtacaccgtggacacgccgggcgccggc
aaccgtggcgcacgccgtatcgtgaccggcggcaccccgccgaccggttggttctacacc
gacgaccattacgagaccttccgcagtttcgaggtcccacctgccgggagctggcaatga
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