Stenotrophomonas aracearum: PDM28_12785
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Entry
PDM28_12785 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_12785
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH47563
UniProt:
A0ABY9Y9L3
LinkDB
All DBs
Position
complement(2811093..2813399)
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AA seq
768 aa
AA seq
DB search
MSFHRTVSASTLRQPRPHALALACTALLGLSGTARAQDASPTSLDAITVTADHRERNLQE
VPVSVGVVQGERLREFTAGGDDTLLALSGRVPSFYAETTTGRIFPRFYIRGLGNIDFYLG
ASQPVSIIQDDVVLEHVVLKSNPVFDVDQVEVLRGPQGTLFGRNTTAGIVKFDSIKPSQD
YAGRVQASYGTHGSVAVDGGFGGPINDIASFRVSALYQHRDDYVDNTYSGPSADGTVAPK
KNAMGGFDDRNVRAQLLLQPNENFSLLASAHARDYEGTSTLFLRSAISNGSNRVDVPRDQ
VAYDEADNNPQAYKTYGGSLKAIYDFGNVSLTSITAYETTSGYSRGDTDGGAAVNFPVNG
VPNGYGQSMGQVRDLDQWTQEVRLANADDNRLKWQVGAYYFDGRDTTDFYQRAWFLQGAA
RNPNNWVRLRNTNTSFAGFGQLSYDVTDRFTLTAGLRQTRDEKRTRLLKTADTAAGVVTY
RGRTDVEMSDTTPSWDLSAMYAFNPQVSVYAKVARGFRGPTIQGRSAVFNADFTTADSET
ILSWEAGVKSSLWDNRLRLNATAFTYTVNDIQLNGNDSNGNGVLFNADKAKAYGLEADME
LRPIPNLSLTAGVSLLHSEIQDDRVYAQVCALNGVVVCTVNDPTIKVGANTFAQIDGSPL
PNAPKYNLNFAARYDMPVNDSDAVFISTDWNKQGYTSFVLYDTAEFNSKGSFEGGLKLGY
SGNYGAWEAALFARNITNEKNLKGVIENYMAAVYNEPRTVGVSLNLNW
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcgcactgtttctgcttcgaccctgcgtcagccgcgcccgcatgccctg
gcgctggcctgcaccgcgctgctgggcctgagtggcaccgcgcgtgcccaggacgccagc
ccgacctcgctggacgccatcaccgtcaccgccgaccaccgcgagcgcaacctgcaggag
gtgccggtttcggtcggcgtggtccagggcgaacgcctgcgcgagttcaccgccggtggc
gacgacaccctgctggccctgagtggccgggtgccgagcttctacgccgaaaccaccacc
ggacgcatcttcccgcgcttctatatccgcggcttgggcaacatcgacttctacctgggt
gcctcgcagccggtctcgatcatccaggacgacgtggtgctggaacacgtggtgctcaag
tccaacccggtcttcgacgtggaccaggtggaagtgctgcgtggcccgcagggcacgctg
tttggtcgcaacaccaccgccggcatcgtcaagttcgacagcatcaagcccagccaggac
tacgccggtcgcgtgcaggccagctatggcacccatggcagcgtggcggtggacggcggc
ttcggtggtccgatcaacgacatcgcctcgttccgcgtctcggcgctgtaccagcatcgc
gatgactacgtggacaacacctacagcggccccagcgccgacggcacggtggcgccgaag
aagaacgcgatgggcggcttcgacgaccgcaacgtgcgcgcgcagctgctgctgcagccc
aatgagaacttctcgctgctggcctcggcgcatgcgcgcgactacgaaggcacctcgacc
ctgttcctgcgcagcgcgatcagcaacggctccaaccgggtggacgtgccgcgcgaccag
gtggcctacgacgaagccgacaacaacccgcaggcgtacaagacctacggcggctcgctg
aaggcgatctacgacttcggcaatgtctcgctgacctcgatcaccgcctacgaaaccacc
tccggctacagccgtggcgacaccgacggcggcgcggcggtcaacttcccggtcaacggc
gtgccgaacggctacggccagtcgatgggccaggtccgcgacctggaccagtggacccag
gaagtgcgcctggccaacgccgacgacaaccgcctgaagtggcaggtcggcgcgtactac
ttcgacggccgcgacaccaccgacttctatcagcgcgcctggttcctgcagggtgccgcg
cgcaacccgaacaactgggtgcgcctgcgcaacaccaacacctcgttcgctggcttcggc
cagctcagctacgacgtgaccgacaggttcaccttgaccgccggcctgcgccagacccgc
gacgagaagcgcacgcgcctgctcaagaccgccgacaccgccgccggcgtggtcacctac
cgtggccgcaccgacgtggaaatgtccgacaccaccccgagctgggacctgagcgcgatg
tatgcgttcaacccgcaggtgagcgtgtacgccaaggtcgcgcgcggcttccgtggcccg
accatccagggccgttcggcggtgttcaacgccgacttcaccacggccgattcggaaacc
atcctgtcgtgggaagcgggcgtcaagagcagcctgtgggacaaccgcctgcgactgaat
gccacggcgttcacctacacggtcaacgacatccagctcaacggcaacgactccaacggc
aacggcgtgctgttcaacgccgacaaggccaaggcctacggcctggaagcggacatggag
ctgcgcccgatcccgaacctgagcctgaccgccggcgtgagcctgctgcacagcgagatc
caggacgaccgcgtgtatgcgcaggtgtgcgcgttgaacggcgtggtggtgtgtacggtg
aacgacccgaccatcaaggtgggcgccaatacctttgcgcagatcgatggcagcccgctg
ccgaacgcgccgaagtacaacctgaacttcgcggcgcgttacgacatgccggtgaacgac
agcgatgcggtgttcatttccaccgactggaacaagcaggggtatacgagcttcgtgctg
tacgacactgccgagttcaattcgaaggggagcttcgagggtggtttgaagctgggctac
tccggcaactatggtgcgtgggaggcggcgttgtttgcgcgcaacatcaccaacgagaag
aacctgaagggcgtgatcgagaactacatggcggcggtgtacaacgaaccgcggaccgtg
ggggtttcgttgaatctcaactggtaa
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