Stenotrophomonas aracearum: PDM28_12890
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Entry
PDM28_12890 CDS
T10111
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00730
Thiamine metabolism
sarc00900
Terpenoid backbone biosynthesis
sarc01100
Metabolic pathways
sarc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PDM28_12890 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PDM28_12890 (dxs)
Enzymes [BR:
sarc01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
PDM28_12890 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
E1_dh
Transketolase_N
DUF1194
Motif
Other DBs
NCBI-ProteinID:
WNH47582
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Position
2831377..2833269
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AA seq
630 aa
AA seq
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MIDSARYPRLSRIQNPDDLRRFDESELPAIADELRAYLIESVGKSGGHFGAGLGVIELTV
ALHYLYQTPVDQLIWDVGHQTYPHKILTGRRDQIHTVKQKDGVAPFPKREESEYDTFGVG
HSSTSISAALGMAIARQREGDDRRVVAVIGDGAMTAGMAYEALNHAGGMDNEPNLLVILN
DNNMSISEAVGGLTKILGRATGSRTLNALREGGKKILGDKKKSPSARFVKRWEEHWKGMF
VPSTFFEEMGFHYTGPIDGHDVPALVATLKTLKGLKGLKLLHVMTTKGKGYERAEGDQIG
YHAVGPFDPDKGLVSKGGAKKPTYTDVFSDWLCDAAAAEPRLLGITPAMREGSGLVRFSK
EYPERYFDVAIAEQHAVTLAAGMATQGAKPVVAIYSTFLQRAYDQLVHDVAVQKLDVLFA
IDRAGVVGPDGATHAGNLDLSFLRCVPNMVVMAPSDEAECRQMLSTGLQYEGPAAVRYPR
GSGTGVDAGTDLSTLEIGKADLRVQGSRIALLAFGSTVPAAEAVGRELGLTVVNMRFIKP
LDRTLLLELAKTHQGFVTIEDNVVAGGAGSGVAELLNAEDVLRPFLHLGLPDSFQHHASR
EDLLAEAGIDAAGIRAAVLKRWPKVATQAA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattccgcacgctatccccgcctgtcgcgcatccagaacccggatgacctgcgc
aggttcgatgaatccgaactgcccgccatcgcagatgaactgcgtgcctacctgatcgag
tcggtcggcaagagtggcggccatttcggcgccgggctgggcgtgatcgagctcaccgtg
gccctgcactacctgtaccagaccccggtcgaccagctgatctgggacgtgggccaccag
acctacccgcacaagatcctcaccggccgccgcgaccagatccacaccgtcaagcagaag
gacggcgtggcgccgttccccaagcgcgaggaaagcgagtacgacaccttcggggtcggc
cattcctccacctcgatctcggccgcgctcggcatggccatcgcgcgccagcgcgagggc
gacgaccgccgcgtggtggcggtgatcggcgacggcgcgatgaccgccgggatggcctat
gaggcactcaaccacgccggcggcatggacaacgagccgaacctgctggtgatcctcaac
gacaacaacatgtcgatctccgaggcggtcggcgggctgaccaagatcctgggccgcgcc
accggcagccgcaccctcaacgcactgcgcgagggcggcaagaagatcctgggcgacaag
aagaagtcgccgtcggcgcgcttcgtcaagcgctgggaagaacactggaaaggcatgttc
gtgccctccaccttcttcgaggaaatgggcttccactacaccggcccgatcgacggccat
gacgtacccgcgctggtggccacgctgaagacgctcaagggcctgaagggcctgaagctg
ctgcacgtgatgaccaccaagggcaagggctacgagcgcgccgaaggcgaccagatcggc
taccacgcggtcggcccgttcgacccggacaagggccttgtttccaagggcggcgccaag
aagcccacctacaccgacgtgttcagcgattggctgtgcgatgccgccgccgccgaaccg
cgcctgctgggcatcaccccggccatgcgcgaaggctcgggcctggtgcgtttcagcaag
gaatacccggagcgctacttcgacgtggccatcgccgagcagcacgcggtgaccctggcc
gccggcatggccacccagggcgccaagccggtagtggcgatctactccaccttcctgcag
cgcgcctacgaccagctggtgcatgacgtggcggtgcagaagctcgacgtgctgttcgcg
atcgaccgcgccggcgtggtcggcccggacggcgccacccacgccggcaacctggacctg
agcttcctacgctgcgtgccgaacatggtggtgatggccccgtccgacgaggccgagtgc
cgccagatgctcagcaccggcctgcagtacgagggtccggctgcggtgcgttacccgcgc
ggcagcgggaccggcgtggacgccggcacggacctgtccacgctggagatcggcaaggcc
gacctgcgtgtgcagggcagccgcattgcgttgctggccttcggcagcaccgtaccggcg
gccgaggccgtgggccgcgagctggggctgaccgtggtcaacatgcgcttcatcaagccg
ctggatcgcacgctgctgctggagctggccaagacccaccagggcttcgtgaccatcgaa
gacaacgtggtggccggcggcgctggttccggcgtggctgaactgctcaacgccgaagac
gtgctgcgcccgttcctgcacctgggcctgcccgacagcttccaacaccacgccagccgc
gaagacctgctggccgaagccgggatcgacgcggccggcatccgggcggcggtgttgaag
cggtggccgaaggtggcaacgcaagccgcgtaa
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