Stenotrophomonas aracearum: PDM28_13070
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Entry
PDM28_13070 CDS
T10111
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarc03016
]
PDM28_13070 (truB)
Enzymes [BR:
sarc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PDM28_13070 (truB)
Transfer RNA biogenesis [BR:
sarc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PDM28_13070 (truB)
Prokaryotic type
PDM28_13070 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WNH47613
UniProt:
A0ABY9YA96
LinkDB
All DBs
Position
complement(2860931..2861839)
Genome browser
AA seq
302 aa
AA seq
DB search
MTRITFRRLDGILLLDKPAGMSSNAALQVARRLFRADKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEVVLGQTTDTDDSDGSVLLERPVPAISREQLEAALAPLKGRIRQ
RAPIYSALKQGGEPLYMKARRGETIEAPERDVEVHAIEVLDQQPTRLSLRVTCGSGTYIR
SLARDLGETLGCGAHIAGLRRLWVDPFREAPMVTLDTLRELAGQGDETALEALLLPLAAG
LADYPRVDLDAEQAPRFSVGQRLRNPAWGAGTVAVYGPNGPILGLGEVDETGRLSPQRCF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaatcaccttccgtcgcctcgacggcatcctgctgctcgacaagcccgccggc
atgagttccaacgccgcgctgcaggtggcacgccgcctgttccgtgccgacaagggcggc
cacaccggcagcctcgacccgctcgccaccggcctgctgccgctgtgcttcggcgaggcc
accaagattgccggcctgctgctgggctcggccaaggcctacgacgccgaagtggtgctg
ggccagaccaccgataccgacgattccgacggcagcgtgctgctggaacgccccgtgcct
gccatcagccgtgagcagctcgaggccgcactggcgcccctgaagggccggatacgacag
cgcgcaccgatctattccgccctcaagcaaggtggcgaaccgctgtacatgaaggcgcgc
cggggcgagaccatcgaagcgccggagcgcgacgtggaggtccacgccatcgaggtgctg
gaccagcagccgacccgcttgtcgctgcgggtgacctgcggttcaggcacctacatccgc
agcctggcccgcgacctgggcgaaaccctgggctgcggcgcccacatcgccggcctgcgc
cgcctgtgggtggacccgttccgcgaggcgcccatggtgaccctggacacgctgcgcgag
ctggccgggcagggcgacgaaaccgccctggaagccctgctgctgccgctggcggccggc
ctggcggactatccgcgagtcgacctggatgctgaacaggcgccccggttctcggtgggc
cagcgcctgcgcaacccggcctggggcgcgggaacggtcgccgtatacggcccaaacggc
ccgatcctggggcttggcgaggtcgacgagaccggccggctgtccccgcagcgctgcttc
aacctctga
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