Stenotrophomonas aracearum: PDM28_13085
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Entry
PDM28_13085 CDS
T10111
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sarc03021
]
PDM28_13085 (nusA)
03009 Ribosome biogenesis [BR:
sarc03009
]
PDM28_13085 (nusA)
Transcription machinery [BR:
sarc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PDM28_13085 (nusA)
Ribosome biogenesis [BR:
sarc03009
]
Prokaryotic type
rRNA transcription factors
PDM28_13085 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WNH47616
LinkDB
All DBs
Position
complement(2865115..2866626)
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AA seq
503 aa
AA seq
DB search
MSKELLLVVDAVANEKGVPREVIFEAIEAALASAAKKRYPDEEVLARVSIDHKDGTYETF
RRWEVVADDVVMESPDRQVRLMDAIDEADGVEVGDFIEEQIENPDFGRIAAQAAKQVIVQ
RVREAERQQVVDAWKDRVGELVTGVVKRAERGNIYVDLGGNAEAFIPKDKGIPRDVLRAG
DRVRGYLAEVRSEPRGPQLFISRAAPEFMIELFKLEVPEVGQGLVVIKACARDPGDRAKI
AVLAHDARTDPIGACIGMRGSRVQAVSNELNGERVDIVLWNDNPANFVINAMAPAEVQSI
IVDEDKHSMDLAVAEERLAQAIGKGGQNVRLASRLTGWQLNVMTQDQVTAKSEAEQGVAR
QLFMDKLEVDEEIAAILVTEGFNTVEEIAYVPVGELLAVEGFDEDIVEELRARARDALLN
EALAVEEGLDEGSPSEDLLALEGMDEATAYALAGHGVRTSEDLSDLAADEILEFGIEDMD
QERAAALILAARAEEIARLERGE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaacttctgctggtagtggatgcggtcgccaatgaaaagggcgttccgcgt
gaagtgatcttcgaggcgatcgaggccgcgctggcttcggccgccaagaagcgctacccc
gatgaggaagtgctggcccgtgtgtcgatcgaccacaaggacggcacctacgaaaccttc
cgccgctgggaagtggtggccgacgacgtggtcatggaatcgccggaccgccaggtgcgc
ctgatggacgccatcgacgaagccgacggcgtggaagtgggcgacttcatcgaagagcag
atcgaaaacccggacttcggccgcatcgcggcgcaggccgccaagcaggtgatcgtccag
cgcgtgcgcgaagccgagcgccagcaggtggtcgatgcgtggaaggaccgcgtgggcgaa
ctggtcaccggcgtggtcaagcgcgccgagcgcggcaacatctatgtggacctgggcggc
aacgccgaggccttcatcccgaaggacaagggcattccgcgcgacgtgctgcgcgccggc
gaccgcgtgcgcggttacctggccgaagtgcgctcggaaccgcgtggtccgcagctgttc
atcagccgcgccgccccggaattcatgatcgagctgttcaagctggaagtgccggaagtg
ggccagggcctggtcgtgatcaaggcctgtgcacgcgacccgggcgaccgcgccaagatc
gccgtgctcgcccacgacgcgcgcaccgatccgatcggcgcctgcatcggcatgcgcggt
tcgcgcgtgcaggccgtgtccaacgagctcaatggcgagcgcgtggacatcgtgctgtgg
aacgacaaccccgccaacttcgtcatcaatgcgatggcgccggcggaagtgcagtcgatc
atcgtcgatgaagacaagcactcgatggacctggccgtggcggaagaacgcctggcccag
gcgatcggcaagggcggccagaacgtgcgcctggccagccgcctgaccggttggcagctg
aatgtgatgacccaggaccaggtgaccgccaagtccgaggcagagcagggcgttgcccgc
cagctgttcatggacaagctggaagtggatgaagaaatcgccgccatcctggtgaccgaa
ggcttcaacaccgtggaagaaatcgcctacgtcccggttggcgaactgctggccgtggaa
ggcttcgacgaagacatcgtcgaggaactgcgtgcccgtgcccgcgacgcgctgctcaac
gaagcgctcgcggtggaagaaggtctggatgaaggttcgccgtctgaagacctgctcgcc
ctggaaggcatggacgaggcaaccgcctacgccctggccggccatggcgtgcgtacgagt
gaggacctgtcggacctggccgccgacgagatcctcgagttcggcatcgaagacatggac
caggagcgcgccgccgccctgatccttgccgcccgagccgaggagatcgcccgcctggag
cgcggcgaatga
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