Stenotrophomonas aracearum: PDM28_13230
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Entry
PDM28_13230 CDS
T10111
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarc03000
]
PDM28_13230
Transcription factors [BR:
sarc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PDM28_13230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WNH47641
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Position
2893208..2894095
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AA seq
295 aa
AA seq
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MSQTPLPPLNALRSFEATARLGGVGRAAEALHVTHGAISRQLRLLEEHLGVTLFEREGRG
VRLTAAGTALQAACDGAFTQIRDAVDRLQRRQRPDALVLGCSGSILARWMIPRLPTLQAE
LPQLALHWSAQDGSFTEQQQALDAVLLLAQPPWPRGWQVRELAPERVGVVVSPQHTAAAR
LRHQPPHALLGEPLLHTTSRPQAWPEWALSHGLDPAQLQLGTGFEHLYFLLEAAVAGLGV
AIAPEPLVADELAAGRLLAPWGFGATGGFWVLATRAGAQDARVEALSDWLAEQLR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacgcccctgcccccgctcaatgccctgcgcagcttcgaggctaccgcccgg
ctgggcggcgtgggtcgggccgccgaagccctgcatgtcacccacggggcgatcagccgc
cagttgcggctgcttgaggagcatctgggcgtgacgctgttcgagcgtgagggacgcggc
gtgcggctgaccgccgccggtaccgcgctgcaggccgcgtgcgacggcgccttcacccag
attcgcgatgcggtagaccgcctgcagcgccggcagcgccccgacgcgctcgtgctgggc
tgcagtggcagcatcctggcgcgctggatgattccgcgcctgccaaccctgcaggccgag
ctgccgcaactggcgctgcactggtcggcgcaggacggcagcttcaccgagcagcagcag
gcgctggacgcggtactgctgctggcgcagccgccgtggccgcgtggctggcaggttcgc
gaactggccccggaacgggtgggcgtggtggtcagcccgcagcatacggcggccgcacgg
ctacgccatcagccgccgcatgccctgctgggcgaaccgcttctgcacaccacctcgcgt
ccgcaggcctggccggagtgggcgctgtcgcatggcctggacccggcgcagctgcagctg
ggcaccgggttcgagcacctgtacttcctgctggaagcggcggtggccgggctgggcgtt
gcgatcgcgccggaaccgctggtggccgatgagctggcggccgggcggctgttggcgcca
tgggggttcggcgcgaccggcggattctgggtgctggcaacacgggcgggcgcgcaggat
gcgcgggtcgaggcgctcagcgattggctggcagaacagcttcggtag
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