Stenotrophomonas aracearum: PDM28_13480
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Entry
PDM28_13480 CDS
T10111
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sarc03019
]
PDM28_13480 (rng)
03009 Ribosome biogenesis [BR:
sarc03009
]
PDM28_13480 (rng)
Messenger RNA biogenesis [BR:
sarc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PDM28_13480 (rng)
Ribosome biogenesis [BR:
sarc03009
]
Prokaryotic type
rRNA processing factors
PDM28_13480 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
TLP1_add_C
CHP02642
Pox_A_type_inc
Motif
Other DBs
NCBI-ProteinID:
WNH47687
UniProt:
A0ABY9YA02
LinkDB
All DBs
Position
complement(2952180..2953667)
Genome browser
AA seq
495 aa
AA seq
DB search
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
GLERAAFLHANDVVRPAPVASADTEGTTLPPPSSVPIVELLRDGQDIVVQVVKDPIGTKG
ARLTTQISIPSRYMVLLPQSKVVGVSARIEDEAERARLKTLVTELSAQHGGYGYIVRTNA
EGQPAEAIAEDIAYLSRVWNVVERRGREAAPCSVIYEDLSLPLRSVRDLIRKDVDKVKVD
SKETFTQLQAFVAKYMPVLAEKLELYSGDRPIFDMFGVEDEIGRALDKQVPLKSGGYLVI
DQTEAMTTIDVNTGSFLGQRNLEETVFRTNLEAAQSVARQLRLRNLGGIIIIDFIDMDDA
EHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSEPCPECSGRGSI
KTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKSIRFQ
ADEQYLQEQFDVVLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaaatcctggtcaacgtcaccccgcgcgaaacccgggtggcggtcattgaa
aacggcatgctgcaggagctgcacatcgaacgcggctggcgccgcggggtggtcggcaac
atctacaagggcaaggtgcagcgggtgatgccgggcatgcaggccgcgttcgtcgaggtc
gggctggaacgcgccgccttcctgcacgccaacgatgtggtgcgcccggccccggtggcc
agtgccgacaccgaaggcaccaccctgccgccgccgtcctccgtcccgatcgtggagctg
ctgcgcgacgggcaggacatcgtggtgcaggtggtgaaggatccgatcggcaccaagggc
gcccggctcaccacccagatcagcattccctcgcgctacatggtgctgctgccgcagtcc
aaggtggtcggggtgtcggcacggatcgaggacgaggccgagcgggcgcgcctgaagacg
ctggtgaccgaactttcggcccagcacggcggctacggctacatcgtgcggaccaacgcc
gagggccagccggccgaggccatcgccgaggacatcgcctacctgtcgcgggtctggaac
gtggtcgagcgccgtggccgcgaggccgccccgtgcagcgtgatctacgaagacctgagc
ctgccgctgcgctcggtgcgcgacctgatccgcaaggacgtggacaaggtcaaggtggac
tcgaaggaaaccttcacccagctgcaggcgttcgtggccaagtacatgccggtgctggcc
gagaagctggagctgtacagcggggaccgcccgatcttcgacatgttcggggtcgaggat
gaaatcggccgcgcgctggacaagcaggtgccgctgaagtccggtggctacctggtgatc
gaccagaccgaggcgatgaccaccatcgacgtcaacaccgggtcgttcctgggccagcgc
aatctggaagagacggtgttccgcaccaacctggaagcggcccagtcggtggcgcgccag
ctgcggctgcgcaacctgggcgggatcatcatcatcgacttcatcgacatggacgatgcc
gaacaccgccgccaggtgctgcgcacgctggaaaaggcgctggcccgcgaccatgccaag
accacggtctatgagttctcgccgctggggctggtcgagatgacccgcaagcgcaccgtg
gaaagcctggagcggcagctgtccgagccgtgcccggaatgcagcgggcgcggctcgatc
aagaccgccgagacggtcacctacgagatcttccgcgagatcacccgcgcggtgcgccag
ttcgacgcagcgcggctgctggtgatcgcttcgtccaaggtggtggcccggatcaccgac
gaggaatcggcggcggtggccgagctggaggaattcctgggcaagtcgatccgcttccag
gccgatgagcagtacctgcaggagcagttcgatgtcgtcctgctctga
DBGET
integrated database retrieval system
