Stenotrophomonas aracearum: PDM28_13500
Help
Entry
PDM28_13500 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_13500
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WNH47691
UniProt:
A0ABY9YA56
LinkDB
All DBs
Position
2956165..2958975
Genome browser
AA seq
936 aa
AA seq
DB search
MKHPIQRPYRGRRNPLAHSVSSVLTGSVLLLAGAFASSSAMAQDSGATNLDRITVTGSNI
PRTNTETPSPVQVVTRQEIDRSGKTTVAEYLQTLTSDGAGSIPKTFGNGFAGGGAGISLR
GLGAGSTLVLLNGRRMATYGLADDGQKVFTDLSTIPLDAVERVEVLKDGASAIYGSDAIA
GVVNIILRSDFEGAILRGSYGLSGDSDGDAKKATLTAGTGDIAEDGWNAFFSLDVGKTDA
IAISDRKNRDWIGTGDLRQWGIDPADAQFLGGAYLNGRTGGGSGPNGSLFTNTTPALLVP
LPGCQGLTTIPGQTDASIAEQGCLWDPAQQFRSLSPKEEYVNVFGRASFAYGEGGEIYTE
IGYSKKETVFSNTPSGVSGSWGYPGGPVNASSGPGAVVLNAAHPDNILGETARLRYSAWD
VGPRVTTNTNEFTRFLVGTKGNWGDWSYDTAYLHSGTNLVNKRTGFLRYSAVQCALGDPN
CAGGVWRIGDNAGQNSQALYDYISPQIQANAKSSLDMFDFTVSRSLMDLKGGPLGLAMGT
EWRKTSNSLTPQTYTDIGDIIGLGYSAYDGTQNVYAGYVELSAPVLEQLELSGALRYDKY
ESGEGKATPKLGVKWTPADWIALRGSYAEGFRAPNPAENGDGGLAAFSTARDPVRCAVSP
PDDVTTNCGARSVAIITSPNPDLKPEESKSYSFGIVLQPTATTSLTVDAWEIKRTNEIAQ
GSTADAIAAGDVLRDTDLINGIPGTGTILAVNTAYVNANSSRVRGIDTDIRQTFDIGPGQ
LEMDLQWSHVLKFERTEGDSTVDYVGTHGNCDVTNCIGTPEDRINFGTTWKQDAWSVSGV
VNYISSLENKDRRGGDYLAFYWDGTPVEKIASFTTFDLSGRYNITDAFELNASVQNVFDR
TAPLDPTTYGGVNYNPLHFSGAIGRYFTIGAKYTFN
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacacccgatccaacggccctaccgtggccgccgcaacccgctggcgcactctgtt
tcctccgtacttaccggcagcgtgctgctgctggccggtgccttcgcctcctcctcggcc
atggcccaggactcgggtgccaccaacctggaccgcatcaccgtcaccggttccaacatt
ccccgtaccaataccgaaaccccctctccggtgcaggtggtaacgcgccaggaaatcgac
cgcagcggcaagaccaccgtggccgaatacctgcagacgctgacctccgacggtgcaggc
tccattcccaagaccttcggcaacggcttcgccggcggcggtgcgggcatctcgctgcgc
ggcctgggcgccggctccacgctggtgctgttgaacggccgccgcatggccacctatggc
ctggccgatgacggccagaaggtcttcaccgacctgagcaccattccgctggacgcggtc
gagcgcgtggaagtgctgaaggatggcgcgtccgccatctacggttccgacgccatcgcc
ggcgtggtcaacatcatcctgcgcagcgacttcgaaggcgccatcctgcgcggttcgtac
ggcctgtccggcgacagcgacggcgacgccaagaaggcgaccctgaccgccggtaccggc
gacatcgccgaagacggctggaacgcgttcttcagcctggacgtgggcaagaccgacgcg
atcgcgatcagcgaccgcaagaaccgcgactggatcggcaccggcgacctgcgccagtgg
ggcatcgacccggccgacgcacagttcctcggcggcgcctacctcaacggccgcaccggc
ggcggttccggcccgaacggttcgctgttcaccaacactacccccgcgctgctggtgccg
ctgccgggctgccagggcctgaccaccatccccggccagaccgatgcctcgatcgccgaa
cagggctgcctgtgggatccggcgcagcagttccgctcgctgagcccgaaggaggaatac
gtcaacgtgttcggtcgcgccagcttcgcctacggcgaaggcggcgagatctacaccgaa
atcggctactccaagaaggaaacggtgttcagcaacaccccgtcgggcgtgtccggcagc
tggggttacccaggcggcccggtcaacgccagcagcggtccgggtgccgtggtactcaac
gccgcccatcccgacaacatcctcggcgagaccgcgcgcctgcgctattcggcctgggac
gtcggtccgcgcgtgaccaccaacaccaatgagttcacccgcttcctggtcggcaccaag
ggcaactggggcgactggagctacgacaccgcctacctgcattcgggtaccaacctggtc
aacaagcgcaccggcttcctgcgctacagcgccgtgcagtgcgcactgggcgacccgaac
tgcgccggcggcgtgtggcggatcggcgacaacgccgggcagaactcgcaggccctgtac
gactacatctcgccgcagatccaggccaacgccaagtccagcctggacatgttcgacttc
accgtgtcgcgcagcctgatggacctcaagggcggcccgctcggcctggccatgggtacc
gagtggcgcaagaccagcaacagcctgaccccgcagacctacaccgacatcggcgacatc
atcggcctgggttactcggcctatgacggcacccagaacgtgtacgccggttacgtcgaa
ctctcggcgccggtgctggaacagctggaactgtccggcgcgctgcgttacgacaagtac
gaaagcggtgaaggcaaggccacgccgaagctgggcgtgaagtggaccccagccgactgg
atcgccctgcgcggctcctacgcggaaggcttccgtgccccgaacccggccgaaaacggc
gacggcggcctggcggcgttctccaccgcccgcgacccggtccgttgcgcggtcagcccg
ccggacgatgtcaccaccaactgcggcgcgcgctcggtggcgatcatcaccagcccgaac
ccggacctgaagccggaagagtccaagagctactcgttcggtatcgtgctgcagccgacc
gccaccacctcgctgaccgtggacgcctgggaaatcaagcgcaccaatgaaatcgcgcag
ggcagcaccgccgatgccatcgcagcgggagacgtgctgcgcgacaccgacctgatcaac
ggcattcccggcaccggcaccatcctggcggtcaacaccgcctacgtgaacgccaactcg
tcgcgggtccgtggtatcgacaccgatatccgccagaccttcgacatcggtccgggccag
ctggaaatggacctgcagtggagccacgtgctcaagttcgagcgcaccgaaggcgacagc
accgtcgattacgtgggcacgcacggcaactgcgacgtgaccaactgcatcggcacgccg
gaagaccgcatcaacttcggcaccacctggaagcaggacgcgtggagcgtgagcggcgtg
gtcaactacatcagcagcctggagaacaaggaccgccgcggtggcgactacctggcgttc
tactgggacggcacgccggtggagaagatcgcctcgttcaccaccttcgacctgtccggt
cgctacaacatcaccgacgcgttcgaactcaacgcctcggtgcagaacgtgttcgaccgc
accgccccgctggatccgaccacctacggtggcgtgaactacaacccgctgcacttcagc
ggcgccatcggccgctacttcaccatcggtgcgaagtacaccttcaactga
DBGET
integrated database retrieval system
