Stenotrophomonas aracearum: PDM28_13925
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Entry
PDM28_13925 CDS
T10111
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PDM28_13925 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarc03400
]
PDM28_13925 (recO)
DNA repair and recombination proteins [BR:
sarc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PDM28_13925 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PDM28_13925 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
WNH47772
UniProt:
A0ABY9YA80
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All DBs
Position
complement(3041579..3042295)
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AA seq
238 aa
AA seq
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MRIEDEPAFVLHARSWRETSLLVEMLTEQHGRIGVLARGVSSPRSQALRAALQPLQWIRF
SAVQRGELAQLRGAEALDAAPRLSGDAMLAGFYVNELVMRLAPRQDPLPELYAYYGQMRQ
RLGAGESLAWTLRRFERDLLEALGFGFDLSHGSDGEPIDPAARYELDPLEGPRRLLSERG
ADPRRGTATGSALLALAEDEMPGTDDLASLRRGMRAVLLHHLGGRGLKSWEMLEDLRR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgaagacgaaccggcgttcgtgctgcacgcccgctcctggcgggagaccagc
ctgctggtcgagatgctcaccgaacagcacggacggatcggggtgctggcgcgcggcgtc
agcagcccgcgcagccaggcgctgcgcgccgcgctgcagccgctgcaatggatccgcttc
agcgcggtgcaacgtggcgaactggcccagctgcggggtgccgaagcgctcgacgccgcg
ccgcgattgagcggtgatgcgatgctggccggcttctacgtcaacgagctggtgatgcgg
ctggcgccccgccaggacccgctgcccgagctgtacgcgtattacggccagatgcgacag
cggcttggtgccggggaatcgctggcctggaccctgcgccggtttgagcgcgatctgctg
gaagcgttggggtttggtttcgacctgtcgcatggcagcgatggcgaaccgatcgacccg
gcggcccgctacgagctggacccgctggaagggccgcggcgactgctcagcgagcggggc
gccgatccccggcgcggcaccgccaccggcagcgcattgctggcgctggccgaagatgaa
atgccgggcaccgacgacctggccagcctgcgccgcggcatgcgcgcagtgttgttgcac
cacctgggtgggcgtgggctgaagtcgtgggagatgttggaggacctacgccggtag
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