Stenotrophomonas aracearum: PDM28_14185
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Entry
PDM28_14185 CDS
T10111
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarc03000
]
PDM28_14185 (prpR)
Transcription factors [BR:
sarc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PDM28_14185 (prpR)
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
HTH_23
HTH_11
HTH_Tnp_1_2
AAA_16
AAA_19
HTH_28
HTH_17
AAA
HTH_30
AAA_2
YdaS_toxin
ketoacyl-synt
Hydrolase
ATPase
Motif
Other DBs
NCBI-ProteinID:
WNH47819
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All DBs
Position
3103943..3105538
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AA seq
531 aa
AA seq
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MSIRLPRPRLPDPDPGALPVIWTVSVSRLTGLLGDVIPEFDRRARIVPINLGFEEAVDVI
GQRLRREHCDVVIAGGSNAAYLRSRLEVPLVPIQANGFDLMEALARARRIAPRIGLVTHA
SDVPSFNSFQHSFGLDIEHRRFVTREDARDCIADLRANGIEVIVGTGMAIDHAEQVGLPG
VLLYSADSVRHAFEHALELTQTLARSGATLPRRRVAGARRAERPLLLGDSAPMQDVRERI
ALYAPHDSTVLVTGATGTGKELVARQLHASSGRSGRFVALNCGAISESLLEAELFGYTEG
AFTGARRGGRVGLVEAADGGTLFLDEIGELPLPLQTRLLRVLEEREVLRVGATEPTPVDV
RVVAATLQALESLVQAQRFRRDLYYRLAALRIALPTLQERPQDVPELLEHFFQQLGQRAS
PLDAEATQQLCAYAWPGNVRELRNLVDRLRIHWPLQAGALGVAQLRSWLPELQQALPTAA
GAAPALPAIATRPSPAVLQQWLDDHQGNREQLATRLGVSRTTLWRWLRVTG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccgcctgccccgcccccgcctgcccgaccccgaccccggcgccctgccggtg
atctggacggtgagcgtgtcgcgcctgaccgggctgctcggcgatgtgattcccgagttc
gaccggcgcgcccgcatcgtgccgatcaacctgggttttgaagaggcggtggatgtgatc
ggccagcgcctgcgtcgtgagcactgcgacgtggtgattgccggcggctccaacgcggcc
tacctgcgcagccggctggaggtgccgctggtgccgatccaggccaacggcttcgacctg
atggaagcgctggcacgggcgcggcggatcgcgccacggatcgggctggttacgcatgcc
agcgacgtgcccagcttcaacagcttccagcacagcttcgggctggacatcgaacaccgc
cgcttcgtcacccgcgaagacgcgcgcgactgcatcgccgacctgcgcgccaacggcatt
gaagtgatcgtcggcaccggcatggccatcgaccatgccgaacaggtggggctgcccggg
gtgctgctgtactcggccgattcggtgcggcacgcgttcgaacatgcgctggaactgacc
cagaccctggcccgctccggcgcgacactcccgcgccggcgcgttgccggcgcacgacgc
gcggaacggccgctgctgctcggcgacagcgcgccgatgcaggacgtacgcgaacgcatc
gcgctgtacgccccgcatgacagcaccgtactggtcaccggcgccaccggcaccggcaag
gaactggtcgcgcgccagctgcacgcttccagcggacgcagcggacgcttcgtggcgctg
aactgcggtgcgatcagcgaatcgctgctggaagcggagctgttcggctacaccgaaggc
gcgttcaccggcgcgcggcgcggcggacgggttgggctggtcgaagccgccgacggcggc
accctgttcctcgacgagatcggcgagctgccgctgccgttgcagacccggctgctgcgg
gtgctggaggagcgcgaggtgctgcgggtgggcgccaccgaacccaccccggtcgacgta
agggtggtcgccgccactctgcaggccctggaatcgctggtgcaggcgcaacgcttccgc
cgcgacctgtactaccggctggcggcgctgcgcattgcgctgcccaccctgcaggagcgg
ccgcaggacgtgcccgagctgctggagcatttcttccagcagctcgggcaacgcgcctca
ccgctggacgcggaagccacccagcagctctgcgcgtatgcctggcccggcaacgtccgc
gagctgcgcaacctggtcgaccggctgcgcatccattggccgctgcaggcgggtgcgctt
ggggtggcccagctgcggtcctggttgcccgaactgcagcaggcgctccccaccgccgca
ggtgcggcgcccgctctccccgccatcgccacccggccttcaccggccgtgctgcagcag
tggctggatgaccaccagggcaaccgtgaacagctggcgacacgcctgggtgtgtcgcgt
acgaccctatggcgatggctgcgcgttacaggctaa
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