Stenotrophomonas aracearum: PDM28_14695
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Entry
PDM28_14695 CDS
T10111
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDM28_14695 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sarc01007
]
PDM28_14695 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sarc03016
]
PDM28_14695 (aspS)
03029 Mitochondrial biogenesis [BR:
sarc03029
]
PDM28_14695 (aspS)
Enzymes [BR:
sarc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PDM28_14695 (aspS)
Amino acid related enzymes [BR:
sarc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PDM28_14695 (aspS)
Transfer RNA biogenesis [BR:
sarc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PDM28_14695 (aspS)
Prokaryotic type
Other AARSs
PDM28_14695 (aspS)
Mitochondrial biogenesis [BR:
sarc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PDM28_14695 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WNH47912
LinkDB
All DBs
Position
complement(3226771..3228519)
Genome browser
AA seq
582 aa
AA seq
DB search
MRTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENADVFAVA
ASLGYEDVLQVEGVVRKRHAVNDKIRTGQVEIVATRITVLNKAEPLPFHAHENPGEETRL
KYRYLDLRRPEMQRMQRTRIKLVQAVRRHLDGEGFQDIETPILTKATPEGARDFLVPARM
HPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQLEFTQLDMEFAFVRER
DVQDFVEGMIRAIFKEVVDVELAGSFPRMTWAEAMRRYGSDKPDLRIALELVDVAELVKA
SEFPVFASAAANPDGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYIKIAENGEVS
SPIAKFFSEDAFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGKDFGLVADGWA
PLWVTDFPMFEYDDEAQRYVALHHPFTAPAVDDIADLRANAKTAVSRGYDMVLNGNEIGG
GSIRIHRSDMQSAVFELLGIGAEEAEAKFGFLLDALRFGAPPHGGIAFGIDRIAALMAGT
ESIRDVIPFPKTTGAQCLMTGAPSPIPDEQLAEVHIQVRPKK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccacttctgcggcctggtcgacgagaccctgattggccagactgtcaccctc
gccggctggaccgacgttgcccgcaacctgggcggcgtgtgcttcatcgatctgcgcgat
catgaaggcatcgtgcaggtgaccgtggagcctgaaaacgcggacgtgttcgccgtggcc
gccagcctgggttacgaagacgtgctgcaggtggagggcgtggtgcgcaagcgccatgcg
gtgaacgacaagatccggaccggccaggtcgagatcgtcgccacccgcatcaccgtgctg
aacaaggccgagccgctgccgttccacgcgcacgagaacccgggcgaggaaacccgcctg
aagtaccgctacctggacctgcgccgcccggaaatgcagcgcatgcagcgcacccgcatc
aagctggtgcaggcggtgcgccgccacctggacggcgaaggtttccaggacatcgaaacc
ccgatcctgaccaaggccaccccggaaggcgcgcgcgacttcctggtgccggcgcgcatg
cacccgggcgagttctacgcactgccgcagagcccgcagctgttcaagcagatcctgatg
gtggccggcttcgaccgctactaccagatcgcgcgctgcttccgcgacgaagcgctgcgc
gccgaccgccagctggaattcacccagctggacatggaattcgccttcgtgcgcgagcgc
gacgtgcaggacttcgtggaaggcatgatccgcgccatcttcaaggaagtggtggacgtg
gagctggccggcagcttcccgcgcatgacctgggccgaggcgatgcgtcgctatggctcg
gacaagccggacctgcgcatcgcgctggagctggtggacgtggccgagctggtcaaggcc
agcgagttcccggtgttcgccagcgccgccgctaatccggacggccgcgtggccgcgctg
cgcattcccggcggtgcgagcctttcgcgcaagcagatcgatgaatatgccgcgcacgcc
gccaagtacggcgccaagggcctggcctacatcaagatcgccgagaacggcgaagtcagc
tcgccgatcgccaagttcttcagcgaagacgccttcgccgcgctggtcgcgcacgtcggc
gccggtaatggcgacatcgtgttcttcggtgccggtggctacaacaaggtgtccgacttc
atgggcgcgctgcgcctgaaggccggcaaggacttcggcctggtcgccgacggttgggcg
ccgctgtgggtgaccgacttcccgatgttcgagtacgacgacgaagcccagcgctacgtg
gccctgcatcaccccttcaccgccccggcggtggacgacattgccgacctgcgcgccaac
gcgaagacggccgtgtcgcgcggctatgacatggtgctgaacggcaacgagatcggcggc
ggttcgatccgtatccaccgttcggacatgcagagcgcggtgttcgagctgctcggcatc
ggcgccgaagaggccgaagccaagttcggcttcctgctcgacgccctgcgtttcggcgcg
ccgccgcacggtggcatcgccttcggcatcgaccgtatcgccgcgctgatggccggcacc
gagtcgatccgcgacgtcattccgttcccgaagaccaccggcgcgcagtgcctgatgacc
ggcgccccgtcgccgatcccggacgagcagctggccgaagtgcacatccaggtccgcccg
aagaaataa
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