Stenotrophomonas aracearum: PDM28_14880
Help
Entry
PDM28_14880 CDS
T10111
Name
(GenBank) RHS repeat protein
Organism
sarc Stenotrophomonas aracearum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RE_BanI
Motif
Other DBs
NCBI-ProteinID:
WNH47949
LinkDB
All DBs
Position
complement(3278577..3282197)
Genome browser
AA seq
1206 aa
AA seq
DB search
MTLLSRLPSAFDAMRCAFRFGYENKRLSTITLPDGAEAKYTYDVHGNLVQVFRPDGSVRT
YLYAEPGLAPGAIPNLMTGIVEGGFRCATFSYDEEGMVTGSRLHAEGLPVDVTSIAYNAD
GTATSVNNLGDVKQHVVGGRRFSAITKTTDGLGSRSFAFNDDGRLTSSVDAAGRQTTVSY
VDSYSGPISQTVTRTDVSVGRISRTTRDANNRVVEQRVSKQTAAGEQLTSLSRKVYDPQG
RLRFSCQYDVSESTDYVCGSLALAPSNVRQTQNTYCSDADAAGKPSQCPLPGLQLSTINP
IGAPTQFEYYAANDAGCDAGGSCQYRKGDLKSEVDALGRRTEYLEYDALGNPVQIKGIDG
TVVERLFDTSGRILAETLKGDVPANDRITLNEYNSTGKLTRTTGPDGVWTRIHYDTADRL
TSVEDATGNRINYVLDGAGNRLREEVRDSAGVLRRSLNRLFDTASRMTRVTGADGQATQM
RYDAVGNLLETENPAGTVSKTTYDGVGRPLQQIDDLGGINAEVRYEYAGNGQVERIVDPK
GLATTYAYDGFGQVVIQTSPDSGITQFTYDRLGNTLTRTDARGVTAQYEYDAVGRTTAVR
FADPAADIQYVYDQPSGQCPAGERAGAGRLSSMIDPSGRTDYCYNLMGDLVRRVQVTDGQ
ALTLRYAYEASGRLQSMTYPDGSLVDYGYDALGQVISMGVTPAGGSREILLQGLKTLPFG
PVTTWTFGNGRRLDRSYDQDYRPVAISDARDGLNVAFGFDPVGNITSLTDVGQQGQGATL
DYDALGRLTAFKDAQTGVAIEEYSYDATGNRLSFGNSDGVLAYTYAADSHRLMSVDSAER
SYDAAGNTLTIGSEWRYSYDLAGRLSIATQSGSQQTSYRHNGAGQRVMRKAGDQARLSLY
GEGGEWLGSYDAANSPSQQVVWLGSRPVGLIQAGHILYIEVDHLGSPRAIIHPHRDRSVW
SWSLVGEAFGSGQPSEDVDQDGVIQRLDLRFPGQQFDPLLGLNYNYFRDYEPEIGRYAQS
DPVGLAAGSSTYSYVLGSPLSLSDRKGLACDQRGCWVTPAEQACADAGNYGLYYQAACTG
GDLYACRAREVALNQGLLSAITNTRLGSSILDGIREPDCDAANAEMQRRMERVRIDLARS
HADALRALGATPDSPRRLDRWSDIGRFHEQVFKRHGAGEVFGGKTYDKYFGRGGFGYDWC
PEPSCK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgctgtcacgtctgccctcggcgtttgatgccatgcgttgcgcatttcgtttt
ggttacgagaacaaacgtctatcgacgataaccttgcccgatggcgcagaggcgaagtac
acctacgatgttcatgggaacctcgttcaagtcttcaggcctgacggtagtgtgcgcacc
tacctctacgcggaaccaggtcttgcgccgggggcaatccccaacctcatgaccggtatc
gtagagggcggcttccgctgtgcgacattctcttacgacgaagaaggtatggtcacgggc
agccgtctgcacgctgagggattgcccgtcgacgtcacaagcattgcctacaacgccgat
ggtacggcgacctccgtcaataaccttggggatgtgaagcaacatgtggttggcggacga
aggttcagtgccattaccaagaccacggatggacttggttcgcgttcctttgccttcaat
gacgacggccgcctcacctccagtgtcgacgctgccgggcgccagactacggtctcgtac
gtagattcgtacagtggcccgatatcccagacggttacgcgcactgacgtctccgtcggc
agaatcagccgcaccacacgtgacgcgaacaatcgcgtagtcgagcagcgcgtcagcaag
caaaccgccgctggcgaacaactcacctcactgagccgcaaagtctacgacccccaaggt
cgtctccgattctcctgccagtacgacgtcagcgagagcaccgactacgtctgcggctcg
cttgcgctagctccatccaacgtacggcaaacccagaacacctactgctcagacgccgac
gcagccggcaagccctcccagtgcccgctgccgggccttcagctctccaccatcaaccct
atcggcgctccaacccaattcgagtactacgccgccaatgacgccggttgcgacgcaggc
ggaagttgccagtaccgcaaaggcgacctaaagtccgaagtggatgcactcggccgccgc
accgagtacctggagtacgacgccctcggcaaccctgtgcagatcaaggggatcgacggg
accgtggtggagcgcctgttcgacactagcgggcgcatcctggcagagacgctcaaaggc
gacgtgccagccaacgaccgcatcacgctcaatgagtacaactccaccggcaagctgacc
cgcaccacaggccccgacggcgtctggacccggattcactacgacaccgccgaccgcctc
actagcgtggaagacgcaaccggcaaccgcatcaactacgtgctggacggcgcaggcaac
cggctgcgcgaggaagtgcgcgacagcgcgggcgtactgcggcgctcgctaaaccgcctg
ttcgacaccgcaagccgcatgacccgcgtgaccggggcagatggtcaagcgacccagatg
cgctacgacgccgtgggcaacctgctggaaacggagaacccggcaggtacggtgtccaag
actacctacgacggggtggggcggcccctccagcagattgacgatctgggcggcatcaac
gccgaggtgcgctacgagtacgccggcaatgggcaggtcgagcggatagtcgatcccaag
gggttggcaacgacctatgcctacgatggcttcggccaggtcgttatccagaccagcccg
gacagcggaatcacccagttcacctacgaccgcctcggcaacacgctgacccgcaccgac
gcacggggtgtaaccgcgcagtacgagtacgacgccgtggggcgcaccaccgccgttcgc
ttcgccgatccggcagcagacatccagtacgtctacgaccagccgtcgggccagtgcccg
gctggcgaacgtgccggggcagggcgcctttccagcatgatcgaccccagcggtcgcacg
gactactgctacaacctcatgggcgatctggtccgccgggtgcaggtaacggacgggcag
gcgttgacgctgcgttatgcctacgaggcctctggccgactgcagtccatgacctacccg
gacggcagtctggtcgactatggctacgatgcgcttggccaggttatcagcatgggggtc
accccggccggtggtagccgcgaaatactgctgcagggcctgaagacgctgcctttcggc
ccggtgacgacctggactttcggcaatggtcgccggctggatcgcagctacgaccaggac
taccgcccggtcgccatcagcgacgcgcgcgatgggctgaatgtcgcgtttgggttcgat
ccggtgggcaacatcacctcgctgaccgatgtgggtcagcaagggcagggtgcgacgctg
gactatgacgcactggggcgcttgactgctttcaaggacgcgcagactggggtggcgatt
gaggagtacagctatgacgctaccgggaatcggctgagctttggcaattcggatggtgtc
ctggcctatacatacgcggccgatagccatcggctgatgtcggtggattctgcggagcga
agttacgatgcagcgggcaacacactgactatcggaagcgagtggcgatactcctacgac
cttgctggtcgactcagtattgcgactcaatctggctcacagcagacaagctaccgacac
aatggcgctggtcagcgagtcatgcggaaagcgggagatcaagcaagactatctctgtat
ggcgagggaggtgagtggctggggtcgtacgacgctgctaatagtccctcccagcaagtg
gtttggctgggatcccggccagtgggcctgatccaggcggggcacattctctatattgag
gtcgatcacttgggctcgccacgcgcaatcatccatccgcatcgggatagatcggtgtgg
agttggagtttagtcggggaggcattcggctccgggcaaccatcagaggacgtggatcaa
gacggcgtaatccagaggctagaccttcgctttcccggtcagcaattcgacccgctgttg
ggattgaactacaactatttccgtgactatgaacctgagatcggccggtacgctcagagt
gacccggttggacttgctgcaggctcatcaacatactcctatgtgctgggaagtccgctt
agtctttcggaccgtaaggggcttgcgtgcgatcaacgaggttgctgggtcacgcccgct
gaacaggcatgcgcagatgcgggcaactatgggctttactatcaggccgcgtgtactgga
ggtgatctgtatgcatgtcgggcccgtgaagtggcactcaatcaaggcttgctgtctgcg
atcaccaataccagactcggcagctcaatacttgacggaattcgagagccagattgcgat
gctgccaatgcggagatgcagcgaagaatggagagagttcgaatagacttggcaagatct
cacgcagacgccctgcgagcactcggtgccactccagacagcccaagaaggcttgaccgt
tggagtgacataggcaggtttcacgagcaggtcttcaagcgtcacggggcaggcgaggtg
tttggcgggaagacctatgacaagtacttcggcagagggggcttcgggtatgactggtgt
ccggagccgagctgcaagtag
DBGET
integrated database retrieval system
