Stenotrophomonas aracearum: PDM28_15975
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Entry
PDM28_15975 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_15975
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_15975
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH48152
UniProt:
A0ABY9YBA9
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All DBs
Position
complement(3537644..3540514)
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AA seq
956 aa
AA seq
DB search
MNTLHYRPLAAAVALCLLSVPTLATAQDASRTPTDLDRVEVTGTRIKRAEVEGQVPIQTL
TRSEIERTGLNSIGEVLQQLTGSGSALNAKFNSSGNFGFPPDGSGVGAGSAQVDLRHLGA
KRVLVLVDGIRWVNESSASGVGAATDLNTIPLAIVERIEVLEDGASSLYGSDAIAGVVNI
ITRREFDGGQVTLNYGEYTKGDGTQKGVDLAWGTSGDRYTLFLGASWTKQDDVKASSREQ
SRYPIPGTGLSFGSSATPTGRFMFTDPNTGIAYNITPNNGATNPTFNGVGGCDRTDDYHC
FTTADRFNFAEYNLLLTPSERKGIFGQFRFDITDNVQWYIKALANRRESTNQAGPEPLFF
GPDGATGNPLADNIVISALNPYNPFGFDLDSGSNLSMIGRRPVEGGPRIFEQEVNTTYFA
TGLTGLFQAADRSWSWDVNGMYSKNKAEQTNFGSYNIYNANIALGDPAVCAATPGCVPLN
IFGGPGTITRQMLDWIQPVVRDRSQNELSLFTANLSSDLFTLPAGPVSFATGYEYRKYEG
EYQPDPITVAGHYNGVPSLPTSGSYDVNEMYLELAVPIFANSPLGDKLDLSLAGRYSDYS
TFGGEFTPKYGLRWQVTNDFVLRTSYAEGFRAPSIGELYGSAARADLQLFDPCSVGLGGT
PPRGSAANCAALGVPAGFQQANSQISVTTGGNDQLDPETSRSFSAGFVWSPWFGNNASWS
ERFDVEVTFYRHNIEGAIQAINAQTQLDLCVDTLDPLYCGGITRASTGAVSGFNNRLTNL
GSIKTDGWDVDLFWTFPQSDIGQFKLGWQNTFVGRYEAVGAAGQRQPQEPGVEVTDSSIP
EWTSNASLSWNLGNWNASWTVRHISKLTEECGDAAAFPVCSDQVAGTNELAATTYNDFQV
GYKFDWMKGLQLSAGLNNAFDKDPPICLSCSLNGYDASTYDIPRGRYWYVRADLRF
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgcattaccgcccgttggcggctgctgtagcgctgtgcctgctgtccgtc
cccacccttgccaccgcgcaggatgcgtcccgcacccccaccgacctggaccgggtggaa
gtcaccggtacccgcatcaagcgcgccgaggtcgaaggccaggtgccgatccagaccctg
acccgcagcgagatcgaacgcaccggtctcaactccatcggcgaagtcctgcagcagctg
accggctccggttcggcgctcaacgccaagttcaactcgtccggcaacttcggtttcccg
cctgacggcagcggcgtcggtgccggttcggcccaggtcgacctgcgccatctcggtgcc
aagcgggtgctggtgctggtcgacggcatccgctgggtcaacgaatcctccgcctcgggc
gtgggcgcggccaccgacctcaacaccattccgctggcgatcgtcgaacgcatcgaagtg
ctcgaagacggcgcgtcctcgctgtacgggtcggatgccatcgccggcgtggtcaacatc
atcacccgccgcgagttcgacggcggccaggtcaccctgaactacggcgagtacaccaag
ggcgacggtacccagaagggcgtggacctggcctggggcaccagcggcgaccgttacacc
ctgttcctcggcgcgagctggaccaagcaggacgacgtaaaggccagcagccgtgaacag
tcgcgctacccgatccccggcaccggcctgtcgttcggcagctcggccacgccgaccggg
cgcttcatgttcaccgacccgaataccggcatcgcctacaacatcaccccgaacaacggc
gcgaccaacccgaccttcaacggcgtgggcggctgcgaccgcaccgacgactaccactgc
ttcaccaccgcggaccgcttcaacttcgccgagtacaacctgctgctcactccgtccgag
cgcaagggcatcttcggccagttccgcttcgacatcaccgacaacgtgcagtggtacatc
aaggcgctggccaaccgccgcgagtcgaccaaccaggccggtccggaaccgctgttcttc
gggcctgacggcgctaccggcaatccgctggccgacaacatcgtcatctccgcgctcaac
ccgtacaacccattcggcttcgacctggattcgggcagcaacctgagcatgatcgggcgc
cgaccggtggaaggcgggccgcgcatcttcgagcaggaagtgaacaccacgtacttcgcc
accgggttgaccggcctgttccaggccgcagaccgcagctggtcgtgggacgtcaacggc
atgtacagcaagaacaaggccgaacagaccaacttcggcagctacaacatctacaacgcg
aacatcgcgctgggtgacccggccgtgtgcgcggccacgcccggctgcgtgccgctgaac
atcttcggcggccccggcaccatcacgcggcagatgctggactggatccagccggtggtg
cgcgaccgcagccagaacgagctgagcctgttcaccgccaacctgagcagcgacctgttc
accctgccggccggcccggtgtcgttcgcgaccggttacgagtaccgcaagtacgagggt
gagtaccaaccggacccgatcaccgtggccgggcactacaacggcgtgccgtcgctgccg
acttccggttcgtacgacgtcaatgaaatgtacctggaactggcggtgccgatcttcgcc
aacagtccgctcggcgacaaactggacctgagcctggccgggcgctattcggactactcc
accttcggtggcgagttcacgccgaagtacggcctgcgctggcaggtgaccaacgacttc
gtgctgcggaccagctatgccgaaggcttccgtgctccgtccatcggtgaactgtacggt
tcggccgcgcgcgccgacctgcagctgttcgatccgtgctcggtcggcctgggcggcacc
ccgccgcgcggcagtgcggccaactgcgcggcgctgggcgtgccggccggcttccagcag
gccaactcgcagatctcggtcaccaccggcggcaacgaccagctcgatccggaaacctcg
cgcagcttcagtgccggcttcgtgtggagcccgtggttcggcaacaacgcctcgtggtcg
gaacgcttcgacgtggaagtgaccttctaccgccacaacatcgaaggcgcgatccaggcg
atcaatgcccagacccagcttgacctgtgcgtggacacgctggacccgctgtactgcggc
ggcatcacccgcgcctccaccggtgcggtcagtggcttcaacaaccgcctgaccaacctg
ggctcgatcaagaccgacggctgggacgtggacctgttctggaccttcccgcagagcgac
atcggccagttcaagctgggctggcagaacaccttcgtcggccgctacgaggccgtgggt
gcggcgggccagcgccagccgcaggaaccgggcgtggaagtcaccgacagctcgattccg
gagtggaccagcaacgcctcgctgagctggaacctgggcaactggaacgcgtcgtggacg
gtgcggcacatctccaagctcaccgaagagtgcggcgatgcggcggcgttcccggtgtgc
agcgaccaggttgccggcaccaacgagctggcggccaccacctacaatgatttccaggtg
ggttacaagttcgactggatgaagggcctgcagctcagcgccggcttgaacaatgcgttc
gacaaggatccgccgatctgcctgtcgtgctcgttgaacgggtatgacgcgtcgacgtat
gacatcccgcgtggccgctactggtacgtgcgcgcggatctgcggttctaa
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