Stenotrophomonas aracearum: PDM28_16075
Help
Entry
PDM28_16075 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_16075
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_16075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Diox-like_N
Hyaluronidase_1
Motif
Other DBs
NCBI-ProteinID:
WNH48171
UniProt:
A0ABY9YBL2
LinkDB
All DBs
Position
3565079..3567739
Genome browser
AA seq
886 aa
AA seq
DB search
MNHRISLLSAAIFSCIAFGAHAQEAQPTATDLDTVTVTGIRGSMEKSLDTKREANARLEV
VTAEDVGKLPAHNVADTLQRLPGVNISSASADEGGFDEADRVSLRGTSPSLTQTLIDGHT
VGSADWFVLSQGNNVGRSVSYSLLPSELVSSVEVNKSSQAKLQDGGTTGTVNIITRTPLQ
FSKQFSAEASVGAVRSDQADSTDPQYSALFNYKNDANNFGVLLQAFYQKRELRREAQEIP
GGFFKIGANDPVAATNPDLIGVSVPGLLGSTLFEQTRTRKGGLLTIEFKPMDSLSLQLSG
FSSELEANNYNRNYMMWGSSFAKLQAPNPGYTVNDGVLTNATYAGVAGRPYAVYDMIYRE
ATAKTNYVTFDADWQINDNLNAKFQAGTTKGEGSTPRQFIAELNSAIGGGASWTTHGAGS
PVDWNVGGDLSPAGATWGGTWGNQEVTAEDKEDWATLDFSQYFSAGALSSVDFGLRFADH
EREALSPEGASPGDIWSALQGSATGQYPSNFASGIGGNFPRDLWYYTPDALQTAITNNST
WLYNNDGPDGRHNYGAEWKVKEKNFAGYVQANFTGDWWSGNVGLRYVDIKQDIDTFLAVS
DPARADVSSLFGMWQRQAFQNKHSRVLPSANIKFDLDDSLVLRVAASQTQTLPDYSALGA
SAWGSDLNRTGGGGNPNLKPTLSTNLDANLEWYFMPRGLLSVGAYHMDMKDYIAFDVVNK
QLFSELTNQLETYAVSTPINADGKVTGVEVAYEQPIGENFGINANYTYANGSSAHTWADG
SHNLLGTSKNTYNVGAFFENDTFGARVSYTRRSSFLISLSGANPYYQDDFGTLSASLSYS
PTKWMSITLDGLNLNNPTYKYYQSASIPTSFYSNGRQYYLNFRFKY
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccgtatcagcctgctttcggcagccattttcagctgtatcgcgttcggcgcc
cacgcgcaggaagcccagcccaccgccaccgacctggacaccgtgaccgtcaccggtatc
cgcggctcgatggagaagtcgctcgacaccaagcgtgaagccaatgcgcgcctggaagtg
gtcaccgccgaagacgtcggcaagctgccggcgcacaacgtggccgacaccctgcagcgc
ctgccgggcgtgaacatcagctccgccagcgccgacgaaggcggcttcgacgaagccgac
cgcgtcagcctgcgcggcacctcgccgagcctgacccagacgctgatcgacggtcacacc
gtcggttcggccgactggttcgtgctcagccagggcaacaacgtgggccgcagcgtcagc
tactcgctgctgccgtccgagctggtcagttcggtggaagtgaacaagtcttcgcaggcc
aagctgcaggacggcggcaccaccggtaccgtcaacatcatcacccgcaccccgctgcag
ttctccaagcagttcagcgcggaagcctcggtaggcgcggtgcgctcggaccaggccgac
tccaccgatccgcagtactcggcgctgttcaactacaagaatgacgccaacaacttcggc
gtgttgctgcaggccttctaccagaagcgtgagctgcgccgtgaagcgcaggaaattccg
ggcggcttcttcaagatcggcgccaacgatccggtcgccgcgaccaacccggacctgatc
ggcgtgagcgtgccgggcctgctgggttccaccctgttcgaacagacccgcacccgcaag
ggcggcctgctgaccatcgagttcaagccgatggacagcctcagcctgcagctgagcggc
ttcagctccgagctcgaagcgaacaactacaaccgcaactacatgatgtggggcagcagc
ttcgccaagctgcaggcgccgaatccgggctacaccgtcaacgacggtgtgctgaccaat
gcgacctacgccggtgtcgccggccggccgtatgcggtctacgacatgatctaccgcgaa
gccaccgcgaagaccaactacgtcacctttgacgcggattggcagatcaacgacaacctc
aacgcgaaattccaggccggcaccaccaagggtgaaggctccaccccgcgccagttcatt
gccgaactgaactcggccatcggtggcggcgccagctggaccacccacggtgcaggttcg
ccggtggactggaacgtgggcggcgacctcagcccggccggcgcaacctggggcggcacc
tggggcaaccaggaagtgaccgccgaagacaaggaagactgggccacgctggacttcagc
cagtacttctcggccggcgcgctgagctcggtggacttcggcctgcgctttgccgaccac
gagcgtgaagcgctgtcgccggaaggcgcttcgcccggcgacatctggtcggcgctgcag
ggcagtgccaccggccagtacccgagcaacttcgccagtggcattggcggcaacttcccg
cgcgacctgtggtactacaccccggacgcactgcagaccgcgatcaccaacaactccacc
tggctgtacaacaacgacggtccggatggtcgccacaactacggcgccgagtggaaggtg
aaggagaaaaacttcgccggctacgtgcaggccaacttcaccggtgactggtggagcggc
aacgtcggcctgcgttacgtcgacatcaagcaggacatcgacaccttcctggcggtgagc
gacccggcccgcgccgacgtcagcagcctgttcggcatgtggcagcgccaggcgttccag
aacaagcacagccgcgtgctgccgagcgccaacatcaagttcgacctggacgacagcctg
gtgctgcgcgtcgccgcgtcgcagacccagaccctgccggactactcggcactgggcgcc
tcggcgtggggctcggacctgaaccgcaccggtggcggcggcaacccgaacctgaagccg
accctgtcgaccaacctggacgccaacctggagtggtacttcatgccgcgtggcctgctg
tcggtcggcgcttaccacatggacatgaaggactacattgccttcgacgtggtcaacaag
cagctcttcagcgagttgaccaaccagcttgaaacctacgcggtgtccaccccgatcaat
gccgacggcaaggtcaccggcgtggaagtggcgtacgagcagccgatcggcgagaacttc
ggcatcaacgccaactacacctacgccaacggaagctcggcgcacacctgggccgacggc
agccacaacctgctgggcacctcgaagaacacctacaacgtgggcgccttcttcgagaac
gacaccttcggtgcgcgcgtcagctacacccgccgctcctcgttcctgatcagcctgtcc
ggtgccaacccgtactaccaggatgatttcggcacgctgtcggcctcgctgagctactcg
ccgaccaagtggatgagcatcaccctggacggcctgaacctcaacaacccgacctacaag
tactaccagagcgcgtcgatcccgacctcgttctactccaacggtcgtcagtactacttg
aacttccgcttcaagtattaa
DBGET
integrated database retrieval system