Stenotrophomonas aracearum: PDM28_16160
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Entry
PDM28_16160 CDS
T10111
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc00540
Lipopolysaccharide biosynthesis
sarc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PDM28_16160
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sarc01005
]
PDM28_16160
Lipopolysaccharide biosynthesis proteins [BR:
sarc01005
]
Lipid A
PDM28_16160
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
WNH48186
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Position
3584972..3586036
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AA seq
354 aa
AA seq
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MQFKPFALPAALAGALAFAVPTVQAAEQCGPDAMSEHPPQINFRVDNDLFGGADQDQGYT
NGAQITLVSPNLVDYTDDPCLPRLARWVNRHLERLAPGEFEQQNMIFSFAQQIYTPKDFT
RRDVIEDDRPYAGVLVGSFGYNARRGDRLQTTQLTLGVVGPWALGKEVQDAVHDALGDEK
FQGWDNQLHNEPVVMLTHERMRRWPADATDNLSGWGWDAISHYGGAVGNLATHLNAGGEV
RFGWKLPDDFGSTPLRPAGENTAPTRGGKPSGWSFHVFATTDAAWVIRDITLDGNTFRNS
HSVDKRNVVGQAGYGLAVMYNRWKFALARYHSTREFDLQDQSPIYGSFTISRSL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaagccctttgcgttgccggccgcactcgccggtgcccttgcctttgccgtg
cccaccgtacaggcggccgagcagtgcggtcccgatgcgatgagcgagcatcccccgcag
atcaacttccgcgtagacaacgacctgttcggcggcgccgaccaggaccagggctacacc
aacggtgcccagatcaccctggtctcgccgaacctggtcgactacaccgacgatccctgc
ctgccgcgccttgcccgctgggtcaaccgccacctcgaacgcctggcccccggcgaattc
gagcagcagaacatgatcttcagcttcgcccagcagatctacacgcccaaagacttcacc
cgccgcgacgtgatcgaggacgaccgtccctacgccggcgtgctggttggcagcttcggc
tacaacgcccgccgcggcgaccgcctgcagaccacccagctcacccttggcgtggtcggg
ccgtgggcgctgggcaaggaagtgcaggatgccgtgcacgacgcgctcggcgatgagaag
ttccagggctgggacaaccagctgcacaacgagccggtggtgatgctgacccacgagcgc
atgcgccgctggccggccgacgccaccgacaacctcagcggctggggctgggatgcgatc
agccactacggcggtgcggtcggcaacctggccacccacctcaacgccggcggcgaagta
cgcttcggctggaagctgcccgacgatttcggcagcaccccgctgcgcccggccggcgaa
aacaccgcgcccacccgcggcggcaagcccagcggctggtcgttccatgtgttcgccacc
accgacgcagcctgggtgatccgtgacatcaccctggacggcaacaccttccgcaacagc
cacagcgtggacaagcgcaacgtggtcggccaggccggctacggcctggcggtgatgtac
aaccgctggaagttcgccctcgcccgctaccacagcacccgcgagttcgacctgcaggac
cagtcgccgatctatgggtcatttacgatcagcagatcgctgtag
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