Stenotrophomonas aracearum: PDM28_17240
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Entry
PDM28_17240 CDS
T10111
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PDM28_17240 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarc03400
]
PDM28_17240 (ung)
Enzymes [BR:
sarc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PDM28_17240 (ung)
DNA repair and recombination proteins [BR:
sarc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PDM28_17240 (ung)
Prokaryotic type
PDM28_17240 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNH48389
LinkDB
All DBs
Position
complement(3824763..3825497)
Genome browser
AA seq
244 aa
AA seq
DB search
MNDDVQAGIQLEPSWKARIGDYLLRPEMRELAAYLRQRKAAGTHVFPPGPQIFAAFDATP
FEQVKVVILGQDPYHGAGQAHGLSFSVMPGVPVPPSLLNMYKELESDLGLPRPDHGCLLP
WAQRGVLLLNAVLTVEEGQAGAHQKRGWEGFTDHVVETLNREREGLVFLLWGSYAQQKGK
VIDTARHRVLKAPHPSPLSAHRGFLGCGHFSAANEYLERRGLGRVDWSLPPRAALDLAIP
PASR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgacgtacaggcgggcatccagctcgaacccagctggaaggcccgtatcggc
gattacctgctgcgcccggagatgcgtgagcttgcggcctacctgcgccaacgcaaggcg
gccgggacgcatgtattcccgccaggcccgcagatcttcgccgccttcgacgccaccccg
ttcgagcaggtcaaggtggtcatcctcggccaggacccgtaccacggggcagggcaggcg
catggcctgagcttctcggtgatgcccggcgtaccggtgccgccgtcgctgctgaacatg
tacaaggagctggaatcggacctgggcctgccgcgtccggaccatggctgcctgttgccg
tgggcgcagcgcggcgtgctgctgctcaacgcggtgctgaccgtggaagaagggcaggcc
ggtgcgcaccagaagcgtggctgggaaggattcaccgaccacgtggtggagaccctcaac
cgcgagcgcgaggggctggtgttcctgctctggggcagctacgcgcaacagaagggcaag
gtcatcgacaccgcccgccatcgcgtgctcaaggcgccgcacccgtcgccgctgtcggcg
caccgcggcttcctgggctgcgggcatttttccgcagccaacgagtacctggagcgacgc
ggcctgggccgcgtcgactggtcgttgccgccacgggcggcgctggacctggctataccc
ccagcatctcgatga
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integrated database retrieval system
