Stenotrophomonas aracearum: PDM28_17385
Help
Entry
PDM28_17385 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_17385
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_17385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
WNH48417
UniProt:
A0ABY9YC25
LinkDB
All DBs
Position
3864324..3866381
Genome browser
AA seq
685 aa
AA seq
DB search
MRASVLPRRALRPALLALSLSLACTAHAQSRSATELDAVKVTAERTHTDTGALGDRPVRD
TPFAISVIGREDIEKRQVVSLGEAFLTDPSVVTQVSAYASGWSSPIRNRGIDLSYDSYRV
NGLQVSSWGTEWPLEVMEQVELLKGPGGFMYGFGQPGGIINYVTKKPTDTPTFSAQLGWR
EQGIVSGQVDAGGRFGNEQMFGYRFNAYQEKGETFNGGEVDRKVGALSLDARLSDSLTWT
FDGVFQQRDLGEESPQYYFIGLTELPRPIAGDVNNAIPGTFYDTRSSLLSTALHWQINSD
WKASLSYGYTSSWNDVNKIFAYIDDVNGDYDINAYELGGKSEWKLAQAIVQGRFQTGPLS
HQLVAGVSHQTGLGWDRPYEWNNIGRGNLYQRPTVRHDAVGSHELTRGSETIQQAVFLSD
TVDVGHGWSLLAGARYNDFENKGSYHTYPVTPTYAVMYKPADEVTLYTSYVESLEAGSRV
GSDYINAGDVLDPTISKQFEIGAKIEYPRWNANAAAFRLERGANIDRLTSAGKLLVQDGI
TLYEGVEVSGNVLLSDAFSLGGGVTWLDPTYDKLSPDSITQQGNRTAGAARWNGVVHADY
SVQQVEGLSLYALARYYGDVYYDAENTLKLPDYTLVNAGVGYRMQANGHPVTWRASVENL
ANKKYWSNAGIGLPRTFAVSVRFDL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcttccgttcttccgcgccgtgccctgcgcccggccctgcttgcgctttcactg
tcgctggcctgcaccgcccacgcccagtcccgctcggccaccgagctggacgcggtcaag
gtcaccgccgagcgcacccacaccgacaccggcgcactgggcgaccgcccggtacgcgat
accccgttcgcgatctcggtgatcggccgcgaagacatcgagaagcgccaggtggtctcg
ctgggcgaggccttcctgaccgacccctccgtggtcacccaggtcagcgcctacgccagc
ggctggagctcgccgatccgcaaccgcggcatcgacctcagctacgacagctaccgcgtc
aacggcctgcaggtctcgtcctggggcaccgaatggccgctggaagtgatggagcaggtg
gaattgctgaagggtcccggcggtttcatgtacggcttcggccagcccggcggcatcatc
aactacgtcaccaaaaagcccaccgacaccccgaccttctccgcccagctcggctggcgc
gaacagggcatcgtcagcggccaggtcgatgcaggcggtcgtttcggcaacgaacagatg
ttcggctaccgcttcaacgcctaccaggagaaaggtgaaaccttcaacggcggcgaggtc
gaccgcaaggtcggcgcgctgtcgctggacgcccgcctgagcgacagcctcacctggacc
ttcgacggcgtgttccagcagcgcgacctgggcgaagagtcgccgcagtactacttcatc
ggcttgaccgaactgccgcgcccgatcgccggcgacgtcaacaacgccatccccggcacc
ttctacgacacccgctccagcctgctctccaccgccctgcactggcagatcaacagcgac
tggaaggccagcctgagttacggctacacctcgtcgtggaacgacgtgaacaagatcttc
gcctacatcgatgacgtgaacggcgattacgacatcaacgcctacgagctcggcggcaag
agcgaatggaagctcgcccaggccatcgtgcagggccgcttccagaccggcccgctctcg
caccagctggtggccggcgtctcgcaccagaccggcctcggctgggaccgtccgtacgaa
tggaacaacatcggccgcggcaacctgtaccagcgcccgaccgtgcgccacgacgcggtc
ggctcgcacgaactgacccgcggcagcgaaaccatccagcaggccgtgttcctcagcgac
accgtcgacgtcggccacggctggtcgctgctggctggcgcgcgctacaacgacttcgag
aacaagggcagctaccacacctacccggtcaccccgacctacgcggtcatgtacaagccc
gccgacgaagtcaccctctacaccagctacgtcgaatcgctcgaagccggcagccgcgtc
ggcagcgactacatcaacgccggcgacgtgctcgaccccaccatcagcaaacagttcgag
atcggtgccaagatcgaatacccgcgctggaacgccaacgccgccgccttccggctcgaa
cgcggcgccaacatcgaccgcctgaccagcgccggcaaactgctcgtgcaggacggcatc
accctgtacgaaggcgtggaggtcagcggcaacgtcctcctgagcgacgccttcagcctc
ggcggcggcgtcacctggctcgaccccacctacgacaagctctcacccgacagcatcacc
cagcagggcaaccgcaccgcaggcgccgcacgctggaacggcgtggtgcacgccgattac
agcgtgcagcaggtcgaaggcctgagcctgtacgcactcgcccgctattacggcgatgtg
tattacgacgccgagaacaccctgaagctgccggattacaccctggtcaacgccggcgtg
ggataccgcatgcaggcgaacggacatccggtgacgtggcgcgcgagcgtggaaaacctg
gccaacaagaagtattggtcgaacgccggcataggcctgccgcgaacctttgcagtgagc
gtaaggtttgatctgtaa
DBGET
integrated database retrieval system
