Stenotrophomonas aracearum: PDM28_18045
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Entry
PDM28_18045 CDS
T10111
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_18045
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_18045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH48534
UniProt:
A0ABY9YCD1
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All DBs
Position
complement(4019829..4022813)
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AA seq
994 aa
AA seq
DB search
MLNARHRRIPATPLSVALGLALAVSGPAFAQDDDTATDAKSKANATELARVQVTGSNIRR
SDVETSSPVQVISKQDIENMGARTLLQVLDNLPAARPGQQDSRSLFTGSDGASQANLRGL
GAQGTLVLLNGRRLSYYGAPAGFQTQFVNIDAIPAAAIERMEVLTDGASAVYGTDAVAGV
INVITKQSYQGAEVNITADRSSRIDSYGEQQGSITAGFGDLDEDRYNIYASVNLYRRNAI
PLSDFYDKRPSQYYVNNPNYITNLRLGTGSKPGVFNPGSYFAFDPTTNALVREAAPGCNN
VLSDAAGTRCIWETWMNREIDAGAKTERATAYISSHFLIGDTTEAFAEVTYTDIDLTANG
GTPSAYNTTTGNPSSWYSRNTGNVVNQFLTPYLGPNNVYNLASPELKALMGGVVGLNYLM
QDVGANHFGQRNTDQSYRVLAGLRGSLGEDWNWETAFATAGTHSVTYQTVNVNLDGFERA
FGPYTIDPGTGRVIISDNPAYQFGVISEANAQLIREAYPTFDIQSWTRLHTLDGKIEGPL
FSMPAGDVRAAFGFNATRETFYTPGNEDAANGLITQQGGSWFDGKRNTYALFAEAVAPLT
DKLELDAALRVDKYPNFSANLAPKIGLKYQVLPQLLLRGTYSEGFRAPSLAEAGTGGVFA
QLGGFEDDIRCDETNAIANLLRQSNRPGDVDLGNSLLNSDCSRTVARMTQPNQDLKPEKA
KISTLGFVYEPASWMSISADYWFIYRRNEIAAPDYSKEQDILSMTRNPISDNDRANEAAL
AQMCADPASGVSCPGALPGYSVGNVAAVVGQYKNQGRTLVDGFDIDARSRFSLGDWGSLN
VGMAATIARRKEAYINDEDRWYYGNTIGYYGNPRLRATLNADWNYKQVTTSFFINYVGTT
KWAWDRVDAEDNNPETCTAGSLPVNPAQCDGVPSWWTANLSVGWRPDDHWSLGFTVKNLF
NRLPFYDPNSFLGDSSDYASIFGRSYSLQVGYKF
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgcacgccatcgccgcatccccgccacacccttgtccgtcgcgctgggcctt
gccctggctgtgagcggtcccgcgttcgcgcaggacgacgacaccgccaccgacgccaag
tcaaaagccaacgctaccgaactcgcgcgcgtgcaggtcaccggctccaacatccgccgc
agcgacgtggaaacgtcctcgccggtgcaggtgatcagcaagcaggacatcgagaacatg
ggggcgcgcacgctgctgcaggtgctcgacaacctgccggctgcgcggcccggccagcag
gattcgcgttcgctgttcaccggctccgacggcgcctcgcaggccaacctgcgcggcctg
ggcgcgcagggcacgctggtgctgctcaacggtcgccgcctctcgtactacggcgcgccc
gccgggttccagacccagttcgtcaacatcgacgccattcccgctgccgccatcgaacgc
atggaagtgctgaccgatggcgcctcggccgtgtacggtaccgacgcggtcgccggcgtg
atcaacgtgatcaccaagcagagctaccagggcgcggaggtcaacatcaccgccgaccgt
tcctcgcgcatcgactcctacggcgagcagcagggcagcatcaccgccggcttcggcgac
ctcgacgaggaccgctacaacatctacgcctcggtcaacctgtaccggcgcaacgcgatt
ccgctcagcgacttctacgacaagcggcccagccagtattacgtcaacaacccgaactac
atcaccaacctgcgcctgggcaccggcagcaagccgggcgtgttcaacccgggtagctac
tttgccttcgatccgaccaccaacgcgctggtgcgtgaagcggcaccgggctgcaacaac
gtcctgtccgacgcggcaggcacgcgctgcatctgggaaacgtggatgaaccgcgagatc
gacgccggtgccaagaccgagcgcgccaccgcgtacatcagctcgcacttcctgattggc
gacaccaccgaggccttcgccgaagtcacctacaccgacatcgatctgaccgccaacggc
ggtacgccctcggcctacaacaccaccaccggcaatccgtcgagctggtactcgcgcaac
accggcaacgtggtcaatcagttcctcaccccctatctggggccgaacaacgtctacaac
ctcgccagcccagagctgaaggccctgatgggtggcgtagtgggcttgaactacctgatg
caggacgtgggcgccaaccacttcggccagcgcaacaccgaccagagttaccgtgtactg
gccggcctgcgcggcagtctgggcgaagactggaactgggagaccgcgttcgccaccgcc
ggtacgcactcggtgacctaccagacggtcaacgtgaatttggacggcttcgagcgcgcc
ttcggcccgtacaccatcgaccccggtaccgggcgggtgatcatctccgacaatccggcc
taccagtttggcgtgatcagtgaagccaacgcccagctgatccgcgaggcgtacccgacc
ttcgacatccagtcctggacccgcctgcatacgctggacggcaagatcgaaggcccgttg
ttcagcatgccggccggtgacgtgcgcgcggccttcggcttcaacgccacccgcgaaacc
ttctacacccccggcaacgaagacgcggccaacggcctgatcacccagcagggcggctcg
tggttcgacggcaagcgcaacacctacgcgctgttcgccgaagcggtggcgccgctgacc
gacaagctggaactcgacgcggcactgcgcgtggacaagtatcccaacttcagcgccaac
ctcgccccgaagatcggcctgaagtaccaggtgctgccacagctgctgctgcgcggtacc
tactccgaaggcttccgcgccccgagcctggccgaggccggcaccggcggcgtgttcgca
cagctgggcggtttcgaggacgacatccgttgcgatgaaaccaacgccatcgccaacctg
ctgcgccagtccaaccgccccggcgacgtcgacctgggcaactcgctgctcaacagcgac
tgcagccgtaccgtggcgcgcatgacccagcccaaccaggacctgaagccggagaaggcg
aagatctccacgctcggcttcgtctacgagccggccagctggatgtcgatctccgccgac
tactggttcatctatcgccgcaacgagattgccgcgccggactacagcaaggagcaggac
atcctttcgatgacccgcaacccgatcagcgacaatgaccgcgcgaacgaggccgcgctg
gcccagatgtgtgccgatccggccagcggcgtcagctgccccggcgcactgccgggctac
agcgtgggtaacgtggcggcggtggtgggccagtacaagaaccagggccgcaccctggtg
gacggtttcgatatcgacgcgcgcagccgcttctcgctgggcgattggggttcgttgaac
gtcggcatggcggccaccatcgcacgccgcaaggaggcctacatcaacgatgaagatcgc
tggtactacggcaataccatcggctactacggcaacccgcgcctgcgcgccacgctgaac
gccgactggaactacaagcaggtcaccaccagcttcttcatcaactacgtgggcaccacc
aagtgggcgtgggaccgcgtggatgccgaagacaacaacccggaaacctgtaccgccggc
tcgctgccggtgaacccggcccagtgcgacggcgtgccgtcgtggtggaccgccaacctc
agcgtgggctggcgcccggacgaccattggagcctgggcttcacggtcaagaacctgttc
aaccgtctgccgttctacgacccgaacagcttcctgggtgactccagtgactatgccagc
atcttcggccgcagctacagtctgcaggtcggctacaaattctga
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