Stenotrophomonas aracearum: PDM28_18905
Help
Entry
PDM28_18905 CDS
T10111
Name
(GenBank) carboxypeptidase regulatory-like domain-containing protein
Organism
sarc Stenotrophomonas aracearum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SdrD_B
CLIPPER
SpaA
CarboxypepD_reg
NOMO1-like_2nd
CarbopepD_reg_2
DUF7927
bMG3
CLIPPER_2
EMC7_beta-sandw
fn3_3
CARDB
TRAP_beta
Motif
Other DBs
NCBI-ProteinID:
WNH48698
UniProt:
A0ABY9YE91
LinkDB
All DBs
Position
complement(4225014..4234520)
Genome browser
AA seq
3168 aa
AA seq
DB search
MSSHSDRAACCAAVTSFERAQAPSWRAVLKRSAAALLLATPLSALAIDLQITDFSDTGYD
PVPAGTTVIYNVKVENGANDTATGTVTLFDLPAGTALGSTAPAGCSASPGASGTTRVRCT
NPTLSASTAPYEFKLPVTTTASQPATITVRTAIGFAAALPPDTTPIQNLQGNDPFFGSDT
NVANNRTSQNTTIQASADLELSKSGTPNPVIGGGEITYTLSVRNNGPSVTTGFRVADTLP
PNVTLVGVPTGADWSFTQQNGTYNGTLAVGASTSYSFRGKVNVGTGNIVNSAVVNAGNVP
DAIPDNNAAQVSTAVTAGADLLLSKSVSPAPAAAGSVVTYTLTARNDGPSPATGVSITDP
MPEGFTITGGNAPAGWTCTSNAASDVRTCTLAGNFAPGAQAVITITAQVPSTGTNSSGTV
VNSAQISATTPDPVPANNTGSVGLTVIPDGADLRMSKNKTPPLVPVWNGTGVRTDSVMTS
TLRAQNLGPRTVTGNLQLVDTLAVGEEWVDATGQPYAANTPITAGGFTCSVDRAWNGTAS
QVVTCTQTGGYPVAVNANSAALTLYTLARLQGTLGNTACTGGSGGSAEPTTAGAINLDPN
TTNDCTGGSSRATDARADLSITKRTNAAGDADNIVRDADGSVSYTLQITNSGAATTGVVM
NDPIPGFVTGSTTVTPITTPAGWSCGLSGSAWICRSGSTALATNATATIAFTVNRGLFDS
QSQAAGTCAGQPLQAGRFCNTAGVSVDPSVSGSIGEADASNNSAQDWVQIDPVANVATTA
KDITSGSPGRAGVNTTYRITYQNRGPSMARGVVFNDTFTLPANDAGFVLVSAVRTGTGNT
ACSVTRQDGTINSASAPGGTSWFNTGGAPATLRLTCAPLDMANNSTQTMTVVIRPNVNSG
NTGRQFTNVGSFHFDLNNDGTEDPASGTLGNGVSYNYNSTTSDDTRNAVLDFTAGEVDLI
VNKIDQNFVGAVDPLGFDSRPGQEANNYILYQVSVRNDGPSLSTRTLIEDTITPAAGADV
RFVGSRTGTSTTPQGTLEAPGDRCTVAPGSSNPTTAPQTLSCTMPSIGVSTTEQGVIAAG
QTSYLYLVYQYLASPPATGATLLNSVTARSAETERDSSNNTAVQETSIRTRADLAMTKTS
VVAAPNADPTQPLPAAATSISLRQPFWYVLDVVNNGPGHSLSRDRSGNSPQRGDGVVVTD
TLPAQLEVIGGAEAVTWQKVGNTADAGVVSNGMGNCTLAGRTRVLVPARWTSLPPSGAGS
NTARATSDQVDPNPGNDESTSTHTVVRSSLTGVVFQDRDRSGANGGTQQAGEQAIPGVEV
RLSGQDAYGNTVTQTTTTDTNGAYRFDNLAPAGASGYTVNQVQPTTYVNGPVAPPASGAL
APSAGGTFAVVDPVLSANSLYTGIALGAGVDAVRYNFPEVRRVALSGFVYVDSNYSNTRN
SGDAPIANATVELLDAAGVVLATATTGSDGGYSFAALDPLTAYTLREVLPTGSYRNRPSA
INPGQVGGAACVGCTVATGASGDAATTDRISNIDLSRGDDGTAFNFGEDAITAISGHVYL
DRNGNGDFDAGDAGTRNSQPNGGLQGVTVTLTGAGADGVFGNGDDLAPVTVQTDAQGRYE
FDALVVGQNYRISETQPQGYANAAENASNSITVNALALTGSTGNDFGETLGALSGSVYED
FSNVAANNNNGRRDAGENAIANVTVTLAGTDVLGNPVSLTTTTDGSGAYRFADLLPPQAG
SSYTLTETQPAGYLDGKHTVGNAATPGTTAVANVISGIVISAGQDATGYLFGELANAPIS
GTVYLDRNDDGDNNAGDIGIPGAQVVIVGAGNDGIFGTPDDTTVTLVTNSDGQYTYPGAV
AGQDYRITETQPTGLGEGREQPGNVITISNLPAAGASGNDFGELAGSLSGTVFLDRNNNG
VQDAGEPGLPGVQLQLPAGSVDALGNAVTTALTDADGRYSFEHLLAGTYTVTEQAAQPLF
NGTATINGITHAGTVDGAAAGVASTVATVPSAISAIVLPAGKHAVQQDFAEILPVSIAGT
VFFDVDNDGARNGAAETGIESVTLELTGTDDTGASVSLSVQTDADGRFAFDTLRPGTYTV
TEPQQPAGTSNGITTAGTVGGVSRGTATPITSVPSRISSIDLTTPGSASVDNLFGEIPLN
SGISGKVWTDRNNDGVVDPGETGLANVRVTLAGTDLAGNAISRDTVTDADGSYSFAELPP
GTYVVTEPEQPTGTRDGRTVAGSTGGSVTAPGTAPSQISAVVLGVNQQSINNNFGEIPTA
SIAGRVYNDSNDNGVVDSGEGGIAGVSVVLTGTDDLGQPVNATLTTDAEGRYRFEGLRPG
TYTVTEPTQPPQTLNGITSAGTVSGASVGVVTDRSSVPSAISQIVLPLGVDALEYNFGEI
GDSPDLMVRKASTSTRFTVNNVAGYTIQVRNAGQQPSRGEYVVHDRLPTGLSLDGTPVGT
GWTCTGDAGATRFSCSSQRVLAAGAISPDTIAVQVRVSAAAAEAGTVNNAVLVEGGGENP
FRAPTPAERAAFDGEVGDLPACVDGIIHNACRVPNSVQLAASVGGTVWFDIGSDDQLLDG
GDRRLSAWTVELVDPANGQVVKSTTSAADGSYRFGDVVPGVKWNIRFRDPRSTVLWPFPV
TRETAAGVQEPCDAEAAIARGGVSACVTTDNATSQLEVVLRAGQHLPQQSLPVDPSGVVY
DATTRDPVPGSIVTLAPVGLCSGYDPRTGVLNAAGGGYRIEGSSIAMTVGSEGFYQFAFG
PGAPARCEFQLTVTPPGGYTFVSTMIPPQASALSPAGGAGANHVVQANTQAPTGAVGTAT
EYYLTLFAGSATAAIVHNHLPLDTAVATGLAITKTGDRQTAEIGDTVQYTITVRQTAGSA
LGALNVVDRLPRGFTYIDGTARADGRALPDPAGRPGPLLGFALGPINVGGQIVLTYRVRV
GVGAQQGDGINRAQAFGCSISGGCIDTTAIAPLPGSLASNRAEYRVRVTGGVFTEQACVL
GKVFMDCNNNHLQDREELGIPGVRLYFSDGTWVISDSEGKYSFCGLPPQSHTLKVDASTL
PVGARLTTSSNRNLGDADSLFLDLKNGELHRADFIEGSCANPVLEQVKARRTQGEVRAPE
TEPGQAPLRFESKPARAPQQATDTANQRPIVQPRANPPAAGTATEGQP
NT seq
9507 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccatagcgatcgcgcagcctgctgcgcggcggtgacgtcgttcgagcgcgcg
caggcgccatcgtggcgcgccgtgctgaagcgcagcgcagctgctttgctgctggcaacg
ccgctgtccgcgctggcgatcgacctgcagatcaccgacttctccgacaccggctacgac
ccggtgccggcgggcaccacggtgatctacaacgtcaaggtcgagaacggcgccaacgac
accgccaccggcaccgtgaccctgttcgacctgcccgccggtaccgcgctgggcagcacc
gccccggccggctgcagcgcttccccgggcgccagcggcaccacccgcgtgcgctgcacc
aacccgaccctgagcgcgtccaccgcgccgtacgaattcaagctgccggtgaccaccacc
gcgtcgcagccggccaccatcaccgtgcgcaccgcgatcggctttgccgccgcgctgccg
ccggacaccacgccgatccagaacctgcagggcaacgacccgttcttcggcagcgacact
aacgttgccaacaaccgcaccagccagaacaccaccatccaggcctcggccgatctggag
ctcagcaagagcggcaccccgaacccggtcatcggcggcggcgaaatcacctacaccctg
agcgtgcgcaacaacggccccagcgtgaccaccggcttccgcgtggccgacacgctgccg
ccgaacgtcaccctggtcggcgtgccgaccggtgcggactggtcgttcacccagcagaac
ggcacctacaacggcaccctcgcggtgggcgccagcaccagctattcgttccgcggcaag
gtcaacgtgggcaccggcaacatcgtcaattcggcggtggtcaacgccggcaacgtgccc
gatgcaattccggacaacaacgccgcgcaggtgagcacggcggtgaccgccggtgccgac
ctgctgctctccaagtcggtgtcgccggcgccggcggccgccggttcggtggtgacctat
acgctgaccgcgcgcaacgacgggccgagcccggccaccggcgtgtcgatcaccgacccg
atgccggaaggcttcacgatcaccggcggcaatgccccggcgggttggacctgcaccagc
aacgcggccagcgacgtgcgcacctgcaccttggccggcaacttcgcaccgggcgcgcag
gccgtcatcaccatcaccgcgcaggtgccgtccaccggcaccaacagcagcggtacggtg
gtcaacagcgcgcagatcagcgccaccacgccggacccggtgcccgccaacaacaccggc
agcgtcggcctgaccgtcattcccgacggcgccgacctgcgcatgagcaagaacaagacc
ccgcccctggtgccggtgtggaatggcaccggcgtgcgcaccgacagcgtgatgacctcc
acgctgcgcgcgcagaacctggggccgcgcacggtcaccggcaacctgcaactggtggac
acgctcgccgtgggcgaggagtgggtggatgccacgggtcagccgtatgcggcgaacaca
ccgatcaccgcaggcggcttcacctgcagcgtcgaccgcgcctggaacggtacggcctcc
caggtggtgacctgcacccagaccggcggctacccggttgcggtcaatgccaattctgct
gcgctcacgctgtacacgctggcgcgcctgcagggcacgctgggcaacaccgcgtgcacc
ggcggcagcggcggttcggccgagccgaccactgccggcgccatcaacctggatccgaac
accaccaacgactgcaccgggggcagcagccgcgccacggacgcgcgtgcggacctgtcg
atcaccaagcgcaccaacgccgctggcgacgccgacaacatcgtccgcgatgcggatggc
tcggtgagctacaccctgcagatcaccaacagcggcgcggccaccaccggcgtggtgatg
aacgacccgatcccgggcttcgtcaccggttcgaccacggtcaccccgatcaccaccccg
gccggctggagctgcggcctgagcggcagcgcctggatctgccgctccggcagcaccgcg
ctggcgaccaacgccaccgccacgattgccttcaccgtcaaccgcgggctgttcgacagc
cagagccaggctgcaggcacctgcgccgggcagccgctgcaggccggtcgcttctgcaac
accgccggcgtgagcgtggacccgagtgtctccggctcgatcggcgaagcggacgcgagc
aacaacagcgcccaggactgggtgcagatcgacccggtggccaacgtcgccaccaccgcc
aaggacatcacctcgggcagccccggccgcgccggcgtcaacaccacctaccgcatcacc
taccagaatcgcggcccgtcgatggcgcgtggcgtggtgttcaacgacaccttcaccctg
ccggccaacgacgctggcttcgtgctggtctcggcggtacgcaccggcaccggcaacacc
gcctgcagcgtgacccgtcaggacggcacgatcaattcggcgtccgcacccggcggcacc
tcgtggttcaacaccggcggcgcgccggccacgctgcgcctgacctgcgccccgctggac
atggccaacaattccacccagaccatgacggtggtgatccgcccgaacgtcaacagcggc
aacaccggccgacagttcaccaacgtcggcagcttccatttcgatctcaacaacgacggc
accgaagatccggccagcggcacgctcggcaacggggtcagctacaactacaacagcacc
accagcgatgacacccgcaatgcggtgctcgacttcaccgccggtgaagtagacctgatc
gtcaacaagatcgaccagaacttcgtgggcgcggtggatccgctgggcttcgattcgcgc
ccggggcaggaagccaacaactacatcctctatcaggtcagcgtgcgcaatgacggcccg
tcgctgtccacccgcaccctaatcgaagacaccatcaccccggcagccggcgccgacgta
cgcttcgtcggcagccgcaccggcaccagcaccacgccgcaggggacgctggaagcgccg
ggcgaccgctgcaccgtggccccgggcagcagcaacccgaccacggcgccgcagacgctg
tcgtgcaccatgccgagcatcggcgtgtccaccaccgaacagggcgtgatcgcagcgggg
cagaccagctacctgtacctggtctaccagtacctggcgtcgccgccggcgaccggcgcc
acgctgctgaactcggtcaccgcgcgttcggccgaaaccgagcgcgacagcagcaacaac
acggcggtgcaggaaaccagcatccgcacccgcgccgacctggccatgaccaagaccagc
gtggtggctgcgccgaacgccgacccgacccagccgctgccggcggccgcgaccagcatc
agcctgcgccagccgttctggtacgtgctggacgtggtcaacaacggcccgggccacagc
ctgtcgcgcgaccgcagcggcaacagcccgcagcgcggcgacggcgtcgtggtcaccgac
accctgccggcgcagctggaagtgatcggcggcgccgaggccgtcacttggcagaaggtc
ggcaacaccgccgacgccggcgtggtcagcaatggcatgggcaactgcaccctggccggc
cgcacccgcgtgctggtgccggcgcgctggacctcgctgccgcccagcggcgccggcagc
aacaccgcgcgcgccaccagcgaccaggtagacccgaaccccggcaatgacgagagcacc
agcacccacaccgtggtgcgctcctcgctcaccggcgtggtgttccaggaccgcgaccgc
agcggcgccaacggcggcacccagcaggccggcgagcaggcgatcccgggcgtggaagtg
cgcctgtccgggcaggatgcctatggcaacacggtgacgcagaccaccactaccgacacg
aacggtgcgtaccgcttcgacaacctggccccggccggtgcgagcggctacaccgtgaac
caggtgcagccgaccacctacgtcaacggcccggtcgcaccgccagccagcggcgcactg
gccccgtcggccggtggcacgtttgccgtggtcgacccggtcctcagtgccaattcgctg
tacaccggcatcgcgctgggcgcgggcgtggacgcggtgcgctacaacttcccggaagtg
cggcgcgtggcgctgtccggcttcgtgtacgtggacagcaactacagcaacacccgcaac
agcggtgacgcgccgatcgccaatgccacggtggaactgctggatgccgcaggcgtggtg
ctggcgaccgccaccaccggcagcgacggcggctacagcttcgcagcgctggacccgctg
accgcatacaccctgcgcgaggtgctgccgaccggcagctaccgcaaccgcccgagcgcg
atcaacccgggccaggtgggcggcgcggcctgcgtgggctgcacggtcgccaccggtgcc
tcgggcgatgccgccaccaccgaccggatcagcaacatcgacctgtcgcgcggcgacgac
ggcaccgccttcaacttcggcgaggacgcgatcaccgcgatctccggccacgtgtacctg
gaccgcaatggcaacggcgatttcgatgccggcgatgcggggacccgcaactcgcagccc
aacggcggcctgcagggcgtgaccgtcaccctcaccggagccggcgccgatggcgtgttc
ggcaacggcgacgaccttgcgccggtcaccgtgcagactgatgcacagggccggtacgaa
ttcgatgcactggtggtcgggcagaactaccgcatcagcgagacccagccgcagggctat
gccaacgcggccgagaacgcgtcgaacagcatcacggtcaacgcgctggcgctgaccggc
tccaccggcaatgacttcggcgagacgctgggtgcgctcagcggttcggtctatgaagac
ttctccaacgtcgcggccaacaacaacaacggccgccgggacgcgggcgagaatgccatc
gccaacgtcaccgtaacgctggccggcaccgacgtactcggcaacccggtctcgctgacc
accactaccgacggcagcggtgcctaccgcttcgccgacctgctgccgccgcaggcgggc
agcagctacacgctgaccgaaacccagccggccggttacctggacggcaagcacacggtg
ggcaatgccgccaccccgggcaccactgcggtggccaacgtgatctcgggcatcgtcatc
agcgccggccaggacgccaccggctacctgttcggcgagctggccaatgcgccgatcagc
ggcactgtgtacctggaccgcaacgatgacggcgacaacaacgccggtgacatcggcatt
ccgggcgcgcaggtcgtgatcgtgggcgccggcaacgacggcatcttcggcaccccggac
gacaccacggtgaccctggtcaccaacagcgacggccagtacacctacccgggcgccgtg
gcggggcaggactaccgcatcactgaaacccagccgaccgggctgggcgaaggccgcgaa
cagccgggcaacgtcatcaccatcagcaacctgccggcggctggcgccagcggcaacgac
ttcggcgaactggccggttcgctgtcgggaacggtgttcctggaccgcaacaacaacggt
gtgcaggacgcgggcgaacccggcctgcccggcgtgcagctgcagcttcccgccggcagc
gtggatgcgctgggcaatgcggtgaccaccgcactgaccgacgccgacggccgctacagc
ttcgaacacctgctggccggcacctacacggtgaccgagcaggccgcgcagccgctgttc
aacggcacggcaaccatcaacggcatcacccacgctggcaccgtcgacggtgccgcggcg
ggcgtggcgtcgaccgtggccaccgtgcccagtgcgatcagcgcgatcgtgctgccggcc
ggcaagcacgcggtacagcaggacttcgccgaaatcctgccggtgtcgatcgccggcacg
gtgttcttcgacgtggacaacgacggcgcgcgcaacggcgctgccgagaccggcatcgaa
agcgtgaccctcgagctcaccggcaccgacgacaccggcgccagcgtcagcctgagcgtg
cagaccgacgccgatggccgtttcgccttcgacacgctgcgcccgggcacctacaccgtg
accgagcctcagcagccggccggtaccagcaacggcatcaccaccgccggcaccgtcggg
ggggtcagccgtggcaccgccacgccgatcaccagcgtgcccagccggatcagcagcatc
gacctgaccaccccgggcagcgcctcggtggacaacctgttcggtgagattccgctcaac
agcggcatcagcggcaaggtctggaccgaccgcaacaacgacggggtggtcgatccgggt
gaaaccggcctggccaatgtgcgcgtcaccctggccggcaccgacctggccggcaatgcg
atcagccgcgacaccgtgaccgacgccgacggcagctacagctttgccgagctgccgccc
ggcacctatgtggtgaccgagccggagcagccgaccggcacccgtgacggccgcaccgtg
gccggcagcaccggtggcagcgtgaccgcgccgggcaccgcgccctcgcagatcagcgcg
gtggtgctgggcgtcaaccagcagtcgatcaacaacaacttcggtgagattccgaccgcc
agcattgccggccgcgtctacaacgacagcaatgacaacggcgtggtcgacagcggcgaa
ggcggcattgccggcgtcagcgtagtgctcaccggcaccgatgacctcggtcagccggtc
aacgccaccctgaccaccgatgctgaaggccgctaccgcttcgaaggcctgcgtccgggc
acctacacggtgaccgagccgacccagccgccgcagacgctcaacggcatcaccagcgcg
ggcaccgtgagcggtgccagtgtcggcgtggtcaccgaccgcagcagcgtgccctcggcg
atcagccagatcgtgctgccgctgggcgtggacgcgctggagtacaacttcggtgagatc
ggcgactcgcccgacctgatggtccgcaaggcctcgaccagcacccgcttcacggtcaac
aacgtggccggctacaccatccaggtgcgcaacgccgggcagcagccgagccgcggcgag
tacgtggtgcacgaccgcctgccgaccgggctgagcctggacggcacgccggtgggtacc
ggctggacctgcaccggcgacgccggcgccacccgcttcagctgcagcagccagcgcgtg
ctggcggccggtgcgatctcgcccgacaccattgcggtgcaggtgcgcgtcagcgccgca
gcggccgaggccggcacggtgaacaacgcagtgctggtggaaggcggcggcgagaacccg
ttccgcgccccgacgccggccgagcgtgccgcgttcgacggcgaggtcggcgacctgcca
gcgtgcgtggacggcatcatccacaacgcctgccgcgtgcccaacagcgtgcagctggcc
gcgtcggtcggcggcacggtgtggttcgacatcggcagcgacgaccagctgctcgacggc
ggcgaccgtcgcctgtcggcctggaccgtcgagctggtcgacccggccaacggccaggtg
gtgaagagcaccaccagcgccgccgacggcagctaccgcttcggtgacgtggtgcccggc
gtgaagtggaacatccgcttccgcgacccacgttcgaccgtgctgtggccgttcccggtc
acccgcgaaaccgccgctggcgtgcaggaaccctgcgatgccgaggccgccatcgcgcgc
ggtggggtcagtgcctgcgtcaccaccgacaacgccaccagccagctggaggtggtgttg
cgcgccggccagcacctgccgcagcagagcctgccggtggacccgtcgggcgtggtgtac
gacgccaccacccgcgacccggtgccgggctcgatcgtgaccctggccccggtgggcctg
tgcagcggctacgacccgcgtaccggcgtgctcaacgcggccggtggcggctaccgcatc
gaaggcagcagcatcgcgatgacggtgggcagcgaaggcttctaccagttcgcgttcggt
ccgggcgcgccggcccgctgcgagttccagctgacggtgaccccgccgggtggctacacc
ttcgtgtcgaccatgatcccgccgcaggccagcgcgctgtcgccggccggtggggcaggc
gccaaccatgtggtgcaggccaatacccaggcgccaaccggcgcggtgggcacggcgacc
gagtactacctgaccctgtttgccggttcggccacggcggcgatcgtgcacaaccacctg
ccgctggacaccgcggtggccaccggcctggcgatcaccaagaccggcgaccgccagacc
gcggagatcggcgacaccgtgcagtacaccatcaccgtgcgccagactgccggcagcgcg
cttggcgcgttgaacgtggtcgaccgcctgccgcgtggcttcacctacatcgacggcacc
gcgcgtgccgacggacgcgcgctacccgatcctgccggccgcccgggcccgctgctgggc
tttgcgctgggcccgatcaacgtcggcggccagatcgtgctgacctaccgggtccgcgtg
ggcgtgggtgcgcagcagggcgatggcatcaaccgcgcgcaggcattcggctgttcgatc
agcggcggttgcatcgacaccactgcgatcgccccgctgcccggttcgctggcctccaac
cgtgccgagtaccgcgtgcgcgtcaccggtggcgtgttcaccgaacaggcctgcgtgctc
ggcaaggtgttcatggactgcaacaacaaccacctgcaggaccgcgaagagctcggcatt
ccgggcgtgcgcctgtacttctccgacggcacctgggtgatcagcgattcggaaggcaag
tacagcttctgcggcctgccgccgcagagccacaccctgaaggtggacgccagcacgctg
ccggtgggcgcgcgcctgaccaccagcagcaaccgcaacctgggcgacgccgacagcctg
ttcctggacctgaagaacggtgagctgcaccgcgccgacttcatcgagggcagctgtgcc
aacccggtgctggagcaggtcaaggcccgccgcacccagggcgaggtgcgcgcaccggaa
accgaaccgggccaggcgccgctgcgctttgaaagcaaacccgcgcgggcgccgcaacaa
gcgaccgacacggccaaccagagaccgatcgtgcaaccccgagccaacccgcccgctgcc
ggcaccgcgacggagggccagccatga
DBGET
integrated database retrieval system
