Streptomyces argyrophylli: HKX69_07005
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Entry
HKX69_07005 CDS
T09378
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sarg
Streptomyces argyrophylli
Pathway
sarg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HKX69_07005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarg03000
]
HKX69_07005
03400 DNA repair and recombination proteins [BR:
sarg03400
]
HKX69_07005
Enzymes [BR:
sarg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HKX69_07005
Transcription factors [BR:
sarg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HKX69_07005
DNA repair and recombination proteins [BR:
sarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HKX69_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF7437
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QJS09289
UniProt:
A0A6M4PFK2
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All DBs
Position
complement(1573455..1574852)
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AA seq
465 aa
AA seq
DB search
MKDEDSRYEAVRSRDGRFDGVFFFAVETTGIYCRPSCPAVTPKRHNVRFFATAAAAQGSG
FRACRRCRPDAVPGSADWNVRADVVGRAMRLIADGVVDREGVAGLAARLGYSARQVQRQL
TAELGAGPVALARAQRAHTARVLLQTTDLPVTEIAFASGFASVRQFNDTIREVYAATPTG
VRAAAPRDRAARRAAPGAGIPLRLAHRGPYQSAAVFDQLTREAVPGVEEVTGARGARTYR
RTLRLPYGTGLAAVHERVRTPRTGTGTRPGGWLDARLHLTDPRDLTTAVQRLRRLLDLDA
DPYAVDERLGADPRLAPLVAARPGLRSPGAVDPLEPAVRALAGLNGAAELVRRYGKVLDA
PHGSLTHLFPEPAVLAEAEPGGPLGALAAALADGTVRLDPGADRHDAEEALLALPGMDPA
TVATLRVRALGDPDVAPPGAGVPGTWRPWRSYAVRHLLVAGEPLR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacgaagacagcaggtacgaggcggtacggagccgggacgggcggttcgacggc
gtgttcttcttcgccgtcgagaccaccggcatctactgtcggcccagctgcccggccgtg
acgccgaaacgccacaacgtgcggttcttcgcgacggccgccgccgcgcagggctccggg
ttccgggcctgccggcggtgccggccggacgccgtgccgggctcggccgattggaacgtc
cgcgcggacgtcgtcggccgggccatgcggctgatcgccgacggcgtcgtggaccgcgaa
ggcgtcgcaggtctcgccgcgcggctcggctacagcgcccggcaggtccagcggcagctc
accgccgagctgggcgccgggcccgtggcgctcgcccgggcccagcgggcgcacaccgcg
cgggtgctgctccagaccaccgacctgccggtcaccgagatcgccttcgcgtccgggttc
gccagcgtgcggcagttcaacgacaccatccgcgaggtgtacgcggcgacccccaccggg
gtgcgggccgccgcaccccgcgaccgggccgcccgccgggccgcacccggagccggcatc
cccctccggctcgcccaccgcggcccctaccagtccgccgccgtcttcgaccagctcacg
cgggaggccgtaccgggcgtcgaggaggtgaccggcgcccgaggcgcccgcacctaccgg
cgcaccctgcgcctgccgtacggcaccggtctcgccgccgtccacgaacgcgtccgcacc
ccgcggaccggcaccggcacccgtccgggcggctggctcgacgcccggctgcacctcacc
gacccccgggacctcaccaccgccgtgcagcggctgcgccggctgctcgacctggacgcc
gacccgtacgccgtcgacgagcggctcggcgccgacccccggctcgccccgctggtcgcc
gcccggcccggactgcgctcgcccggtgccgtggacccgctggagcccgccgtacgcgcc
ctggccggcctgaacggcgccgcggaactggtgcgccggtacggcaaggtgctcgacgcg
ccccacgggagcctgacccacctcttcccggagcccgccgtcctcgccgaggccgagccc
ggcggaccgctcggcgcgctcgccgccgccctcgccgacggcaccgtacgactggacccg
ggcgccgaccggcacgacgccgaggaggccctgctcgcgctgcccggcatggacccggcc
accgtcgccaccctgcgcgtccgcgcgctcggcgatcccgacgtcgccccgcccggcgcc
ggtgtcccgggcacctggcggccctggcggtcgtacgccgtgcggcacctgctggtggcg
ggggagccacttcggtga
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