Streptomyces argyrophylli: HKX69_14115
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Entry
HKX69_14115 CDS
T09378
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sarg
Streptomyces argyrophylli
Pathway
sarg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sarg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HKX69_14115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sarg03021
]
HKX69_14115
03400 DNA repair and recombination proteins [BR:
sarg03400
]
HKX69_14115
Enzymes [BR:
sarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HKX69_14115
Transcription machinery [BR:
sarg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HKX69_14115
DNA repair and recombination proteins [BR:
sarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HKX69_14115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QJS10507
UniProt:
A0A6M4PJ48
LinkDB
All DBs
Position
complement(3211090..3214989)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLESD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSTAEAIMAFDAGELALQSPIDIRFPVGTIPPRGWTPPAREEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVRGYEAQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLRLRIADRG
ADGVLRKADDVETSVYARCLAEDIVVDGQVLAPAGTDLGDVLIEELVGRGVEEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVVTPDDGSDETAYPISKRAKV
LVREGDHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSRFEQENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgccccc
gtcacgcacatctggtacttcaagggtgttccctcgcgcctcggctacctgctggacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtacgtcgac
gaggagcgccgtacccgcgacctgccctccctggaggcgcacgtctcggtcgagcgtcag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagtccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagaggctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgccctgaagcggctcaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctcttcgacaacggccgtcgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagctgcgtgacaccaagggcgag
ggccgcgcgttcggttccacggccgaggcgatcatggcgttcgacgccggcgagctcgcg
ctgcagtcgccgatcgacatccgcttcccggtgggcaccatcccgccgcgcgggtggacc
ccgccggcgcgcgaggagggcgagccggagtggcagcagggtgacagcttccgcctgcgc
accaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttctactgggcgacc
cgttccggtgtcaccgtggccatctccgacgtcgtcgttcccgaggcgaagaaggagatc
gtccgcggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgtggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttccccaagaccaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcggcccatcaaggcctcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgctctg
cgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgaccgcggcctgcggctgcggatcgccgaccgtggc
gccgacggcgtgctgcgcaaggcggacgacgtggagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtggtcgacggccaggtgctggccccggccggcaccgacctgggcgac
gtcctcatcgaggagctcgtcggccgtggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgccgtcggtacctgcgcgatgtgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcgtacccgatctcgaagcgtgccaaggtc
ctggtccgcgagggcgaccacgtcgaggtgggccagcagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtgtacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcccgcttcgagcaggagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctgatgggtatcaccaaggcctcgctggcgacc
gagtcctggctgtcggcggcgtccttccaggagacgacgcgagtcctcaccgacgcggcg
atcaacgccaagtcggactcgctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgtaccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
