Streptomyces argyrophylli: HKX69_17980
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Entry
HKX69_17980 CDS
T09378
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sarg
Streptomyces argyrophylli
Brite
KEGG Orthology (KO) [BR:
sarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sarg03021
]
HKX69_17980
Transcription machinery [BR:
sarg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HKX69_17980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
NirdL-like_HTH
MarR
HTH_3
DUF134
DUF7343
HTH_5
DUF4423
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QJS11152
UniProt:
A0A6M4PJZ8
LinkDB
All DBs
Position
complement(4056760..4057617)
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AA seq
285 aa
AA seq
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MTDEEVALTLSASTAPPQEEAPTPTPPAPEKRRGADTRALTQVLFAELKELTPGTPEHTR
VRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPT
VVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTLHGRSPSTAEIAERLRISEDEV
LSCIEAGRSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPEREQR
ILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatgaagaggtggcgttgaccttgtcggccagtactgcgccgccccaggaagag
gcgcccactccgaccccgccggcccccgagaagcgccgcggcgcggacacccgggccctg
acccaggtgctgttcgccgaactgaaggagctcacccccggcacgccggagcacacccgc
gtgcgcggagcgctgatcgaggcgaacctcccgctcgtacgctacgccgccgcccgcttc
cgctcgcgcaacgaacccatggaggacgtcgtccaggtcggcaccatcggactgatcaac
gccatcgaccgcttcgaccccgaccggggcgtgcagttcccgaccttcgcgatgcccacg
gtggtcggcgagatcaagcggtacttccgggacaacgtccgcacggtccacgtcccgcgc
cggctgcacgagctgtgggtgcaggtcaacagcgccaccgaggacctgaccacgctccac
ggccgctcgccgtccaccgccgagatcgccgagcggctccggatcagcgaggacgaggtg
ctcagctgcatcgaggcgggacgctcgtaccacgccacctcgctggaggccgcccaagag
ggtgacggcctgcccggactgctcgaccggatcggctacgaggacccggccctggacggc
gtggaacaccgcgacctggtccgccatctcctcgtccagctccccgagagggagcagcgc
atcctcctcctgcgctactacagcaatctcacccagtcgcagatcagcgcggaactcggc
gtctcccagatgcacgtctcgcgcctcctcgcccgtagcttccagcggctgcgttccgcg
aaccggatcgacgcatag
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