Streptomyces argyrophylli: HKX69_28040
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Entry
HKX69_28040 CDS
T09378
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sarg
Streptomyces argyrophylli
Brite
KEGG Orthology (KO) [BR:
sarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sarg03019
]
HKX69_28040
Enzymes [BR:
sarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HKX69_28040
Messenger RNA biogenesis [BR:
sarg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HKX69_28040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
nSTAND_NTPase5
AAA_22
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJS12873
UniProt:
A0A6M4PS98
LinkDB
All DBs
Position
6252760..6255612
Genome browser
AA seq
950 aa
AA seq
DB search
MIVLLSAGPGTLESTMTEDLSPAERYAAARRRAAEQATALASFREMYDFGLDPFQIEACQ
ALEAGKGVLVAAPTGSGKTIVGEFAVHLALRQGKKCFYTTPIKALSNQKYADLCRRYGTG
KVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWE
EVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGDTDVIVSEHRPVPLFQHVLAGRRMYD
LFEEGEGHKKAVNPDLVRLARMEATRPSYQDRRRGRSMREADRERERRQRSRVWTPGRPE
VIERLDSEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEAREQVRALVEERTASIPTE
DLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPAR
SVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMSPEHLAGLAGT
RTYPLRSSFKPSYNMAVNLVEQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLE
GYKASMTCHLGDFEEYARLRRELKDRETELARQGASERRAEAAVALEKLKPGDVIHVPTG
KYAGLALVLDPGLPAGRSNGHRGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEPLDRMR
IPKTFNPRSPQSRRDLASALRTKAGHIPPERARKKRSQAADDREIARLRTAIRAHPCHGC
NDREDHARWAERYHRLLRDTSQLERRIEGRTNTIARTFDRIVALLTELDYLRGDEVTEHG
KRLARLYGELDLLASECLRERVWEGLAPAELAACVSALVYEARVGDDAMAPKLPSGKAKA
ALGEMVRIWGRLDGLEEEFRISQTEGVGQREPDLGFAWAAYMWASGKGLDEVLREAEMPA
GDFVRWCKQVIDVLGQISAAAPAEGSTVAKAARKAVDQLLRGVVAYSSVG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcagcggggcccggtacgctcgaaagcacgatgacagaggacctc
tcaccggccgagcggtacgcggcagcccgcaggcgggcagccgagcaggccaccgcgctc
gcctccttccgcgagatgtacgacttcggcctcgaccccttccagatcgaggcctgccag
gccctcgaagcgggcaagggcgtcctggtggccgcccccaccggctcgggcaagacgatc
gtgggcgagttcgccgtccacctcgccctgcggcagggcaagaagtgcttctacacgaca
cccatcaaggcgctgtccaaccagaagtacgccgacctgtgccgccgctacggcaccggg
aaggtgggcctgctcaccggcgacaacagcgtgaactccgacgccccggtggtcgtgatg
accaccgaggtgctgcggaacatgctctacgccggttcgcagaccctcctcggcctcggc
tacgtggtcatggacgaggtgcactacctctccgaccgcttccgcggcgccgtctgggaa
gaggtgatcatccacctgcccgagtcggtgaccctggtctcgctctccgccaccgtgtcc
aacgcggaggagttcggtgactggctggacaccgtccgcggcgacacggacgtgatcgtc
tccgagcaccggcccgtgccgctgttccagcacgtgctcgccggccgccggatgtacgac
ctgttcgaggagggcgagggccacaagaaggccgtcaaccccgacctggtccgcctcgcc
cgcatggaggccacccggccgtcgtaccaggaccgcaggcgcggacggtcgatgcgcgag
gccgaccgggagcgcgagcgcagacagcgctcgcgcgtgtggaccccgggccgccccgag
gtcatcgaacggctcgactccgagggcctgctcccggccatcaccttcatcttcagccgg
gccgcctgcgaggccgccgtccagcagtgcctgtacgcgggcctgcggctcaacgacgag
gaggcacgcgagcaggtccgcgccctggtcgaggaacgcaccgcctccatcccgaccgag
gacctgcacgtcctcggctactacgaatggctggagggcctggagcgcggcatcgccgcc
caccacgcgggcatgctgccgaccttcaaggaggtcgtggaggagctgttcgtacgcggt
ctggtcaaggccgtgttcgccaccgagaccctcgcgctcggcatcaacatgcccgcccgc
tcggtggtcctggagaagctcgtcaagtggaacggcgagcagcacgccgacatcaccccc
ggcgagtacacccagctgaccggccgggccggccgccggggcatcgacgtcgagggccac
gccgtggtgctgtggcagcgcggcatgagccccgagcacctcgccgggctcgcgggcacg
cgcacgtacccgctgcgctccagcttcaagccgtcgtacaacatggcggtcaacctggtc
gagcagttcggccggcaccgctcgcgcgagctgctggagacctccttcgcccagttccag
gccgacaagtcggtcgtcgggatctcccgccaggtgcagcgcaacgaggagggcctggag
ggctacaaggcctccatgacctgccacctcggcgacttcgaggagtacgcgcggctgcgc
cgcgagctgaaggaccgggagaccgagctggcccggcagggcgcgagcgagcggcgtgcc
gaggccgccgtggcgctggagaagctgaagccgggcgatgtcatccacgtgcccaccggc
aagtacgcgggcctggccctggtcctggacccgggcctgcccgcgggccggtccaacggc
caccgcggcttcgaccaccacgacgggccgcggccgctggtgctgaccgccgaacggcag
gtcaagcggctggcgtcgatggacttcccggtgccggtcgagccgctggaccggatgcgg
atcccgaagaccttcaacccgcgctcgccgcagtcccggcgggacctcgcctccgcgctg
cggaccaaggccgggcacatcccgccggagcgggcgcgcaagaagcggtcgcaggccgcc
gacgaccgtgagatcgcacggctgcggacggcgatccgggcgcacccctgccacgggtgc
aacgaccgtgaggatcacgcgcgctgggccgagcgctaccaccggctgctgcgcgacacc
tcgcagctggagcggcgcatcgagggccgtacgaacaccatcgcgcggaccttcgaccgg
atcgtggccctgctgaccgagctggactacctgcgcggcgacgaggtcaccgagcacggc
aagcggctcgcgcggctctacggcgaactggacctgctggccagcgagtgcctgcgcgag
cgggtctgggaggggctggcccccgccgaactcgctgcctgtgtctcggcgttggtgtac
gaggcccgggtcggcgacgacgcgatggcgccgaagctgccctccggcaaggccaaggcc
gcgctcggcgagatggtccggatctggggccggctcgacgggctggaggaggagttccgg
atcagccagaccgagggtgtcgggcagcgggagccggacctcgggttcgcctgggccgcg
tacatgtgggcgtccggcaaggggctcgacgaggtgctgcgggaggcggagatgccggcc
ggggacttcgtgcggtggtgcaagcaggtcatcgacgtgctcggacagatctccgccgcg
gctcccgcggaggggtcgaccgtggccaaggcggcgcgcaaggccgtcgaccagttgctg
cggggtgtggtcgcctactcgtccgtgggctga
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