Sphingomonas aliaeris: H5J25_00890
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Entry
H5J25_00890 CDS
T07559
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sari
Sphingomonas aliaeris
Pathway
sari03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H5J25_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_00890
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H5J25_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
QQV78757
UniProt:
A0A974NXS7
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All DBs
Position
complement(217899..218705)
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AA seq
268 aa
AA seq
DB search
MAFGHANLHLGTDASPQPSIIRVIDLETTGQAPPMHGVCEIGWQDVALGPDGRWDLYGEG
GQRFVNPGRPIPPITQAVHHILDEQVANEPFWQDVARPVLDPYPRRIALAAHRATFEEQY
CTPALTRGADWICTWKCALRLWPDSPSFSNQVLRYWRKPAGIDHERGLPAHRAFPDAYVT
AFHLRDMLNEASVAQLIAWSNQPGLLPRVRFGPDRGKSWQEIDEDSLNKFLGDRDIDVRF
TAETEAARRRGGGMVGRPTLQGSLLWDD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ctggcattcgggcatgcgaacctccacttaggcaccgatgcctccccccagccttcgatc
atccgcgtcatcgacctcgaaaccaccggccaggcgcccccgatgcatggcgtgtgcgag
atcgggtggcaggatgtcgcactcggtccggacggacgctgggacctgtatggcgagggc
ggacagcgcttcgtcaatcccggccgtccgatcccgccgatcacgcaggccgtgcatcat
atcttggacgaacaggtcgcgaacgagccgttctggcaggatgtcgcgcgccccgtgctc
gatccctatccgcgacgcatcgcgctggcggcgcaccgtgcgacgttcgaggagcaatat
tgcaccccggcgctgacgcgcggtgcggactggatctgcacgtggaagtgcgccctgcgg
ctgtggcccgattcgccgagcttttccaatcaggtgctgcgctattggcgcaagccggcg
gggatcgatcacgaacgcggcctgccggcacaccgcgcgtttccggatgcatacgtcaca
gcattccacctgcgcgacatgctgaacgaggcgagcgtcgcgcaactgatcgcctggtcg
aaccagcccggcctgctgccgcgggtccgtttcggcccagaccggggcaaatcgtggcag
gagatcgacgaggacagcctcaacaagttcctgggcgaccgcgacatagacgtgcgcttc
acggcggaaaccgaagccgcgcgccggcgtggcggcggtatggtcgggcggcccacgctg
cagggttcgctgctgtgggacgattga
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