Sphingomonas aliaeris: H5J25_03455
Help
Entry
H5J25_03455 CDS
T07559
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sari03016
]
H5J25_03455 (truB)
Enzymes [BR:
sari01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H5J25_03455 (truB)
Transfer RNA biogenesis [BR:
sari03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H5J25_03455 (truB)
Prokaryotic type
H5J25_03455 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QQV77831
UniProt:
A0A974S4U1
LinkDB
All DBs
Position
complement(800552..801550)
Genome browser
AA seq
332 aa
AA seq
DB search
MHGWIILDKPLGLGSTQGVSAVKRALRQGGYGKFKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDGDKVYDFTIRFGVQTDTLDLEGVEIATSDVRPTSAQLAAVLGRFTGPIEQVPPA
YSALKVDGQRAYDLARAGEEVMLASRSVTIHSLHSSPARGGGPSASSADGGGGPPQAERS
RLVPSTASGPPPRAGEELEEATLTAHVSKGTYIRSLARDIALALGTVGHVTMLRRTKAGP
FDLSGAISLDKLDELAMARALEDVTLPLRAALDDIPALPLTSDQAGALRQGRVLVGVAAD
DGQHFACFGDIPVALVEVQDHEVRVVRGFNLD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggataatcctcgacaagccattggggcttggatcgacacagggcgtgtcg
gcggtgaagcgtgcactgcgccagggcgggtacggcaagttcaaggtcggtcacggcggg
acgctggatccgctggcgacgggcgtgctgccgatcgctgtcggcgaggcgacgaagctc
gccgggcggatgctcgacggcgacaaggtgtacgacttcacgatccggttcggcgtgcag
acggatacgctggatctggagggcgtggagatcgcgacgtcggacgtgcgcccgacatcg
gcgcagctcgcggcggtgctgggccggttcaccgggccgatcgagcaggtaccaccggcc
tattccgcgctgaaggtcgatgggcagcgcgcctatgatcttgcgcgcgccggggaagag
gtgatgctggcgagccggtcggtaacgatccattcgcttcactcctccccggcacgggga
gggggaccgtccgcttcttcagcggatggtggaggggggcctccacaagccgagcgctcg
cggctcgtcccctccaccgctagcggtccccctccccgtgccggggaggaactggaggag
gcaaccctcaccgcgcacgtgtccaagggaacgtacatccgcagcctcgcacgagacatc
gcgctggcgctcggaacggtcggtcacgtgacgatgttgcggcggacgaaggccggtccg
ttcgacctgtccggcgcgatatcgctggacaaactggacgaacttgctatggcccgcgcg
ctagaagacgtaactttgcccttgagggcggcgctggacgacatcccggctctccctctt
acctccgatcaggcaggggcgctccgacaggggcgtgttttggtcggggtcgccgcagac
gatggccagcatttcgcgtgtttcggggatatcccggtcgcgctggtggaggttcaggac
catgaggtccgcgtcgtccgtggcttcaacctggattga
DBGET
integrated database retrieval system
