Sphingomonas aliaeris: H5J25_04515
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Entry
H5J25_04515 CDS
T07559
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sari03032
]
H5J25_04515
03036 Chromosome and associated proteins [BR:
sari03036
]
H5J25_04515
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_04515
DNA replication proteins [BR:
sari03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H5J25_04515
Chromosome and associated proteins [BR:
sari03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H5J25_04515
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H5J25_04515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QQV78009
UniProt:
A0A974S4Z2
LinkDB
All DBs
Position
complement(1005997..1006266)
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AA seq
89 aa
AA seq
DB search
MNIGELVKGVAGATGSNEAEAKAAITAVFDQIAVAAAKGDDVSIPGFGKFAVKDRPERQG
RNPASGAAITIAASKKVTFTAAKGLKDKL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggcgaactggtcaagggtgtggcgggagcaaccgggtcgaacgaggcggag
gcgaaggctgccatcacggcggtcttcgatcagatcgccgtcgcggcggccaagggcgac
gatgtttctatcccggggtttggcaagttcgcggtcaaggatcggcctgaacgacagggt
cgtaatcctgctagcggcgcagcgatcacgatcgctgcctccaagaaggtcaccttcacc
gccgccaaaggcctgaaggacaagctctga
DBGET
integrated database retrieval system