Sphingomonas aliaeris: H5J25_05675
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Entry
H5J25_05675 CDS
T07559
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sari03032
]
H5J25_05675
03036 Chromosome and associated proteins [BR:
sari03036
]
H5J25_05675
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_05675
DNA replication proteins [BR:
sari03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H5J25_05675
Chromosome and associated proteins [BR:
sari03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H5J25_05675
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H5J25_05675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QQV78192
UniProt:
A0A974S508
LinkDB
All DBs
Position
1236191..1236463
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIGSVADTSGLSKGDASKAVEAVFDAISASLKKGDEVRLVGFGTFSVSKRKASTG
RNPRTGEPMTIKASTQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggaattgatcggatcggtggccgatacgtcgggcctgagcaagggcgac
gcaagcaaggccgtcgaggcggtcttcgatgcgatctctgcctcgctcaagaagggcgac
gaagtgcgcctcgtcggtttcggtacgttttccgtcagcaagcgcaaggcgtcgaccggg
cgcaacccgcgcaccggcgagccgatgacgatcaaggcatcgacccagccgaagttcaag
gctggcaagggcctgaaggacgcggtgaactga
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integrated database retrieval system
