Sphingomonas aliaeris: H5J25_07110
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Entry
H5J25_07110 CDS
T07559
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari00061
Fatty acid biosynthesis
sari00071
Fatty acid degradation
sari01100
Metabolic pathways
sari01212
Fatty acid metabolism
sari02024
Quorum sensing
sari04146
Peroxisome
Module
sari_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H5J25_07110
00071 Fatty acid degradation
H5J25_07110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H5J25_07110
09145 Cellular community - prokaryotes
02024 Quorum sensing
H5J25_07110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sari01004
]
H5J25_07110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sari04147
]
H5J25_07110
Enzymes [BR:
sari01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H5J25_07110
Lipid biosynthesis proteins [BR:
sari01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
H5J25_07110
Exosome [BR:
sari04147
]
Exosomal proteins
Exosomal proteins of breast milk
H5J25_07110
Exosomal proteins of breast cancer cells
H5J25_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQV78413
UniProt:
A0A974NX35
LinkDB
All DBs
Position
complement(1516863..1518647)
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AA seq
594 aa
AA seq
DB search
MRTLEHFPNLVTMFFTRAASEGGKPFLWHKAGGNWVSLSWADAATQVASLAAGLRAIGLE
RGDRVMLVSENRPEWCISDLAIMAAGCVTVPTYVTNTERDHAHIIENSGARAIIVSNSKL
AKTLLPAAIRSSAAKIVIGIDEIRPTQGLECHVWARLIEQHPATAADAAAQADFKREDLA
CIIYTSGTGGAPRGVMQHHGAILHNVKGCAAVISEDFGWDDEVFLSFLPLSHAYEHTGGQ
HFPIGLGGQIYYAESLDKLAANIEEVRPTIMFVVPRLFEVLRTRISKAIEKQGGMASYLL
DKALEIGAKESEGRVGLMDRPAQLMVRTLFKPKIAKKFGGRMKAMVSGGAPLTPEVGLFF
QSLGVTFLQGYGQTEAAPVISCNRPKAGIRMDSVGPVLVDTEVRIAEDGEILVRGELVMH
GYWRNEAETARVLKDGWLHTGDIGLIDENGRIKITDRKKDIIVNDKGDNVAPQKVEGMLT
LQNEIVQAMIYGDRKPYMVAVLVPDPDWTQEWCAREGATCNFSRLAENPEYRAALTAAVE
RVNKDLSVIERVRRFILADEGFTIENEQLTPSLKIRRHVLREVYATRLDALYKG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgctcgaacatttccccaaccttgtgacgatgttcttcacgcgggcggcgtcg
gaaggcggcaaaccgttcctgtggcacaaggcgggcgggaactgggtgtcgctaagctgg
gcggacgcggcgacgcaggtggcgagccttgccgccgggctgcgcgcgatcgggctggag
cgcggcgaccgcgtcatgctggtcagcgaaaaccggccggaatggtgcatcagcgatctg
gcgatcatggccgcggggtgcgtcaccgtccccacctatgtcaccaacaccgaacgcgat
catgcgcacatcatcgagaattcgggcgcgcgcgcgatcatcgtgtcgaattcgaagctg
gcgaagacgttgctgcccgccgcgatccggtcctccgcggcgaagatcgtcatcggcatc
gacgaaatccgtccgacccaggggctggaatgccatgtctgggcgcggctgatcgaacag
catcccgccaccgccgcggatgccgccgcgcaggccgatttcaagcgcgaggatctggcc
tgcatcatctacaccagcggcaccggcggcgcgccgcgcggcgtgatgcagcatcacggc
gcgatcctgcacaacgtgaagggatgcgcggcggtcatttccgaggatttcggctgggac
gacgaggtcttcctctccttcctgccgctgtcgcacgcttatgaacataccggcgggcag
catttcccgatcgggcttggcgggcagatctattatgccgagagcctcgacaagctggcc
gcgaatatcgaggaggtgcgcccgacgatcatgttcgtcgtcccccgcctgttcgaagtt
ctccgcacccggatcagcaaggcgatcgagaaacagggcggtatggcgtcctacctgctc
gacaaggcgctggagatcggtgcgaaggaaagcgaaggccgcgtcgggctgatggaccgt
ccggcgcagctgatggtgcggactttgttcaagccgaagatcgcgaagaagttcggcggg
cggatgaaggctatggtgtccggcggcgcgccgctgacaccggaagtcgggctgttcttc
cagtcgcttggtgtcacctttctccaggggtacggccagaccgaggctgcgccggtcatc
tcctgcaaccggcccaaggcggggatccggatggattcggtgggtccggtgctggtcgat
accgaagtgcgcatcgccgaggatggcgagatcctggtgcgcggcgaactggtgatgcac
ggttactggcgcaacgaggcggaaaccgcgcgcgtgctgaaggacggctggctgcacacc
ggcgatatcgggctgatcgacgagaacggccggatcaagatcaccgatcgcaagaaggac
atcatcgtcaacgacaagggcgacaatgtcgcgccgcaaaaggtcgagggcatgctgacg
ctgcagaacgagatcgtgcaggcgatgatctacggcgatcgcaagccgtatatggtcgcg
gtgctggtccccgatcccgactggacgcaggaatggtgcgcgcgggaaggcgccacgtgc
aatttcagccggctcgcggagaaccccgaatatcgcgcggcgctgaccgcggcggtcgag
cgcgtcaacaaggacctgtcggtgatcgagcgcgtccgccgcttcatcctggcggacgaa
ggcttcacgatcgagaacgagcaactgaccccgtcgctgaagatccgccgccatgtgctg
cgcgaagtgtatgccacgcggctggacgctttgtataaggggtag
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