Sphingomonas aliaeris: H5J25_07835
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Entry
H5J25_07835 CDS
T07559
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sari
Sphingomonas aliaeris
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sari03009
]
H5J25_07835 (rimO)
Enzymes [BR:
sari01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H5J25_07835 (rimO)
Ribosome biogenesis [BR:
sari03009
]
Prokaryotic type
ribosomal protein modification factors
H5J25_07835 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
sCache_like
Motif
Other DBs
NCBI-ProteinID:
QQV78530
UniProt:
A0A974NX62
LinkDB
All DBs
Position
complement(1661533..1662825)
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AA seq
430 aa
AA seq
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MVSLGCPKNLVDSERILTKLRSDGYAMSADYAGADVVLVNTCGFLDSAKEESLEAIGEAI
AENGRVIVTGCMGKEAEMIRDRFPNVLAVTGAHQYEEVVGAVHNAAPMPPSAFLNLVPDS
GLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEKLIEAGTRELLVI
SQDTSAYGVDIKHHPRMWHGNEVRAHMTDLSRELGKLGAWVRLHYVYPYPHVDQVIPLMA
EGLILPYLDIPFQHASRNVLKLMRRPANEAKVLERIKNWRTIAPDIAIRSTFVVGFPGET
EDDFRYLMDWLEEAQLDRVGAFRFEPVEGAAANDLPDAVPEEIKEERYARLMELTARISA
EKLQAKIGRTLDVIVDAVDEEGGATGRSKADAPEIDGEVFLRDAGHLKQGDIVAVEIEDA
DDHDLYGVPV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgctcggctgtccgaagaacctggtcgacagcgaacgtatcctgacgaagctc
cggtcggacggctatgccatgtccgccgattatgccggcgcggatgtcgtgctggtcaac
acgtgcggctttctcgattccgccaaggaggaatcgctcgaggcgatcggcgaggcgatt
gcggagaacggccgcgtcatcgtcaccggttgcatgggcaaggaagcggagatgatccgc
gatcggttccccaacgttctcgcggtcaccggcgcgcatcaatatgaagaggtcgtcggc
gcggtgcacaatgccgccccgatgccgcccagcgcgttcctcaatctcgttcccgacagc
ggcctgaagctgacaccgcggcattacagctatctgaagatcagtgaggggtgcaatcac
cgctgttcgttctgcatcattccgtcgttgcgcggcgatctggtcagccgccgtcccgac
gccatccttcgcgaggcggagaagctgatcgaggccggcacgcgcgaattgctggtcatc
agccaggacacgtcggcatacggcgtcgatatcaagcatcacccccgcatgtggcacggc
aacgaagtacgcgcgcacatgaccgatctgtcgcgcgaactcggcaagctgggtgcatgg
gtgcgcctgcattacgtctatccctatccacacgtcgatcaggtcatcccgctgatggcg
gaagggctgatccttccctatcttgatatcccgttccagcatgccagccggaacgtcttg
aagctgatgcgccggcccgcgaacgaagcgaaggtgctggagcggatcaagaactggcgg
accatcgcaccggatatcgcgatccggtcgacctttgtcgtcggcttccccggcgagacg
gaagacgatttccggtatctgatggattggctggaagaggcgcaattggaccgggtcggc
gcgttccgcttcgaaccggtcgagggtgccgctgccaacgatctgccagacgctgtgccg
gaagagatcaaggaggagcgctacgcccgcctgatggaactgaccgcgcgcatttccgcc
gagaaactgcaggccaagatcggtcgcacgctggatgtgatagtcgatgcggtcgatgag
gaaggcggcgcgaccggccggtccaaggccgatgcacccgaaatcgacggagaggttttc
ctgcgcgatgccgggcatctgaagcagggcgatatagtggccgtcgagatcgaggatgcg
gacgatcacgacctgtacggcgtgcccgtctga
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